Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   AB6A33_RS14750 Genome accession   NZ_CP163446
Coordinates   2994083..2994727 (-) Length   214 a.a.
NCBI ID   WP_369265035.1    Uniprot ID   -
Organism   Bacillus velezensis strain Hao 2023     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2989083..2999727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6A33_RS14715 (AB6A33_14715) - 2990268..2990699 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  AB6A33_RS14720 (AB6A33_14720) - 2990699..2991040 (+) 342 WP_032876807.1 Na(+)/H(+) antiporter subunit C -
  AB6A33_RS14725 (AB6A33_14725) - 2991033..2992514 (+) 1482 WP_032876804.1 Na+/H+ antiporter subunit D -
  AB6A33_RS14730 (AB6A33_14730) - 2992520..2992996 (+) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  AB6A33_RS14735 (AB6A33_14735) - 2992996..2993280 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  AB6A33_RS14740 (AB6A33_14740) mnhG 2993264..2993638 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  AB6A33_RS14745 (AB6A33_14745) - 2993678..2994061 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  AB6A33_RS14750 (AB6A33_14750) comA 2994083..2994727 (-) 645 WP_369265035.1 response regulator Regulator
  AB6A33_RS14755 (AB6A33_14755) comP 2994808..2997108 (-) 2301 WP_032876801.1 histidine kinase Regulator
  AB6A33_RS14760 (AB6A33_14760) comX 2997122..2997295 (-) 174 WP_012118314.1 competence pheromone ComX -
  AB6A33_RS14765 (AB6A33_14765) - 2997264..2998124 (-) 861 WP_142925231.1 polyprenyl synthetase family protein -
  AB6A33_RS14770 (AB6A33_14770) degQ 2998332..2998472 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  AB6A33_RS14775 (AB6A33_14775) - 2998938..2999279 (+) 342 WP_032876795.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24331.78 Da        Isoelectric Point: 4.9953

>NTDB_id=1029800 AB6A33_RS14750 WP_369265035.1 2994083..2994727(-) (comA) [Bacillus velezensis strain Hao 2023]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGFRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1029800 AB6A33_RS14750 WP_369265035.1 2994083..2994727(-) (comA) [Bacillus velezensis strain Hao 2023]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTTGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGTCTGACATCCATTTTTAATAAGCTGAATGTCGGCTTCCGCACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(153-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

85.981

100

0.86

Multiple sequence alignment