Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   BQ3358_RS02085 Genome accession   NZ_LT615218
Coordinates   445760..446356 (+) Length   198 a.a.
NCBI ID   WP_064127166.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AUS0325     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 440760..451356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BQ3358_RS02055 treR 441685..442413 (+) 729 WP_001118671.1 trehalose operon repressor -
  BQ3358_RS02065 - 442817..442918 (+) 102 WP_001790661.1 hypothetical protein -
  BQ3358_RS02070 - 443056..443580 (+) 525 WP_001167828.1 GNAT family N-acetyltransferase -
  BQ3358_RS02075 dnaX 443649..445346 (+) 1698 WP_001109040.1 DNA polymerase III subunit gamma/tau -
  BQ3358_RS02080 - 445436..445753 (+) 318 WP_001213992.1 YbaB/EbfC family nucleoid-associated protein -
  BQ3358_RS02085 recR 445760..446356 (+) 597 WP_064127166.1 recombination mediator RecR Machinery gene
  BQ3358_RS02090 - 446561..446659 (+) 99 WP_001791812.1 hypothetical protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22098.57 Da        Isoelectric Point: 4.9772

>NTDB_id=1029396 BQ3358_RS02085 WP_064127166.1 445760..446356(+) (recR) [Staphylococcus aureus strain AUS0325]
MHYPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITKNDPCYICEDKQRDRS
VICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLV
KPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1029396 BQ3358_RS02085 WP_064127166.1 445760..446356(+) (recR) [Staphylococcus aureus strain AUS0325]
ATGCATTATCCAGAACCTATATCAAAACTTATTGATAGCTTTATGAAATTGCCAGGCATTGGTCCAAAGACAGCCCAACG
TCTGGCTTTTCATACCTTAGATATGAAAGAAGACGATGTTGTTCAGTTTGCCAAAGCATTAGTAGATGTTAAGAGAGAAT
TAACATATTGTAGCGTATGTGGTCACATTACTAAAAATGATCCATGTTATATTTGTGAAGATAAGCAAAGAGATCGTTCA
GTTATTTGTGTTGTGGAAGATGACAAAGATGTCATAGCTATGGAAAAAATGAGAGAATACAAAGGTTTATATCACGTTTT
ACATGGGTCTATTTCGCCTATGGATGGCATTGGACCAGAAGATATTAATATTCCTTCATTGATTGAACGCTTGAAAAACG
ATGAAGTTAGCGAATTAATCTTAGCTATGAACCCGAACTTAGAGGGGGAATCTACAGCCATGTATATTTCTAGATTAGTT
AAGCCTATAGGTATCAAAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAAC
ATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAA

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(40-78)

Toprim domain (Toprim_4)

(80-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Bacillus subtilis subsp. subtilis str. 168

77.273

100

0.773
  recR Streptococcus pneumoniae R6

64.141

100

0.641
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

48.205

98.485

0.475