Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | NST61_RS12380 | Genome accession | NZ_CP163266 |
| Coordinates | 2496234..2496533 (+) | Length | 99 a.a. |
| NCBI ID | WP_340499959.1 | Uniprot ID | - |
| Organism | Caldifermentibacillus hisashii strain FSL K6-2771 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2491234..2501533
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST61_RS12355 (NST61_12355) | - | 2492581..2492751 (-) | 171 | WP_034770998.1 | DUF2759 domain-containing protein | - |
| NST61_RS12360 (NST61_12360) | - | 2492822..2493064 (-) | 243 | WP_041903963.1 | DUF2626 domain-containing protein | - |
| NST61_RS12365 (NST61_12365) | - | 2493204..2493905 (-) | 702 | WP_034771004.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NST61_RS12370 (NST61_12370) | comGA | 2494116..2495201 (+) | 1086 | WP_328168649.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NST61_RS12375 (NST61_12375) | comGB | 2495176..2496207 (+) | 1032 | WP_161522412.1 | competence type IV pilus assembly protein ComGB | - |
| NST61_RS12380 (NST61_12380) | comGC | 2496234..2496533 (+) | 300 | WP_340499959.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NST61_RS12385 (NST61_12385) | comGD | 2496508..2497011 (+) | 504 | WP_034771013.1 | competence type IV pilus minor pilin ComGD | - |
| NST61_RS12390 (NST61_12390) | - | 2496986..2497342 (+) | 357 | WP_108898282.1 | hypothetical protein | - |
| NST61_RS12395 (NST61_12395) | comGF | 2497314..2497778 (+) | 465 | WP_041903951.1 | competence type IV pilus minor pilin ComGF | - |
| NST61_RS12400 (NST61_12400) | comGG | 2497669..2498199 (+) | 531 | WP_368974193.1 | competence type IV pilus minor pilin ComGG | - |
| NST61_RS12405 (NST61_12405) | - | 2498300..2498485 (+) | 186 | WP_161522413.1 | YqzE family protein | - |
| NST61_RS12410 (NST61_12410) | - | 2498516..2499640 (-) | 1125 | WP_108898284.1 | hypothetical protein | - |
| NST61_RS12415 (NST61_12415) | - | 2499808..2500995 (-) | 1188 | WP_368974194.1 | M14 family metallopeptidase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11025.95 Da Isoelectric Point: 5.0890
>NTDB_id=1029194 NST61_RS12380 WP_340499959.1 2496234..2496533(+) (comGC) [Caldifermentibacillus hisashii strain FSL K6-2771]
MLKKESAFTLIEMMIVLFVITILLLITIPNVTKHQTSISNKGCEGLENMVQAEIQAYQIDHNKLPASIDDLKNGYLKEEP
VCPDGRKIVISNGDAVIKE
MLKKESAFTLIEMMIVLFVITILLLITIPNVTKHQTSISNKGCEGLENMVQAEIQAYQIDHNKLPASIDDLKNGYLKEEP
VCPDGRKIVISNGDAVIKE
Nucleotide
Download Length: 300 bp
>NTDB_id=1029194 NST61_RS12380 WP_340499959.1 2496234..2496533(+) (comGC) [Caldifermentibacillus hisashii strain FSL K6-2771]
ATGTTGAAAAAAGAATCTGCATTTACGTTAATCGAGATGATGATCGTTCTTTTCGTCATCACTATTTTACTGCTTATAAC
CATTCCAAACGTGACAAAACACCAGACAAGTATCAGCAATAAGGGCTGTGAAGGATTAGAAAATATGGTTCAGGCAGAAA
TCCAAGCCTATCAAATAGATCATAATAAATTACCTGCTTCTATTGATGACTTGAAAAACGGTTATTTAAAAGAAGAACCG
GTATGTCCGGATGGAAGGAAGATTGTTATCTCTAATGGTGACGCAGTTATCAAAGAGTGA
ATGTTGAAAAAAGAATCTGCATTTACGTTAATCGAGATGATGATCGTTCTTTTCGTCATCACTATTTTACTGCTTATAAC
CATTCCAAACGTGACAAAACACCAGACAAGTATCAGCAATAAGGGCTGTGAAGGATTAGAAAATATGGTTCAGGCAGAAA
TCCAAGCCTATCAAATAGATCATAATAAATTACCTGCTTCTATTGATGACTTGAAAAACGGTTATTTAAAAGAAGAACCG
GTATGTCCGGATGGAAGGAAGATTGTTATCTCTAATGGTGACGCAGTTATCAAAGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
53.684 |
95.96 |
0.515 |
| comGC | Staphylococcus aureus MW2 |
46.939 |
98.99 |
0.465 |
| comGC | Staphylococcus aureus N315 |
46.939 |
98.99 |
0.465 |