Detailed information NTG1028970

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AB4851_RS18350
• Genome accession: NZ_CP163165
• Coordinates: 687120..688328 (-)
• Length: 402 a.a.
• NCBI ID: WP_414450962.1
• Uniprot ID: -
• Organism: Burkholderia sp. 22PA0099
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 682120..693328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4851_RS18330 (AB4851_18315)	-	682555..682941 (+)	387	WP_414443130.1	nuclear transport factor 2 family protein	-
AB4851_RS18335 (AB4851_18320)	leuA	683130..684782 (-)	1653	WP_414450959.1	2-isopropylmalate synthase	-
AB4851_RS18340 (AB4851_18325)	ybiB	685258..686238 (-)	981	WP_414450960.1	DNA-binding protein YbiB	-
AB4851_RS18345 (AB4851_18330)	maiA	686413..687057 (+)	645	WP_414450961.1	maleylacetoacetate isomerase	-
AB4851_RS18350 (AB4851_18335)	pilA	687120..688328 (-)	1209	WP_414450962.1	signal recognition particle-docking protein FtsY	Machinery gene
AB4851_RS18355 (AB4851_18340)	rsmD	688507..689121 (+)	615	WP_414450963.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AB4851_RS18360 (AB4851_18345)	coaD	689233..689733 (+)	501	WP_414443124.1	pantetheine-phosphate adenylyltransferase	-
AB4851_RS18365 (AB4851_18350)	-	689799..690068 (+)	270	WP_414443123.1	YfhL family 4Fe-4S dicluster ferredoxin	-
AB4851_RS18370 (AB4851_18355)	hisC	690207..691274 (-)	1068	WP_414450964.1	histidinol-phosphate transaminase	-
AB4851_RS18375 (AB4851_18360)	pth	691358..691963 (-)	606	WP_414443121.1	aminoacyl-tRNA hydrolase	-
AB4851_RS18380 (AB4851_18365)	-	692050..692664 (-)	615	WP_414443120.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 402 a.a.
• Molecular weight: 42196.38 Da
• Isoelectric Point: 5.1576

>NTDB_id=1028970 AB4851_RS18350 WP_414450962.1 687120..688328(-) (pilA) [Burkholderia sp. 22PA0099]
MFSFFKRLIGSKADDASQDAPADEQTGAEAAPDTPRPAEPRAGATPATPAMPAALAPVTAQPAAPVAPAPQVAPPVASTP
TAPAPRADSTAVEIVPPPAPEPAAKKSWIARLRSGLSKTSSNLTNVFVSTKIDEDLYEELETALLMSDAGVDATEYLLGA
LRERVKAQRLTDPQQVKTALRTLLVELLQPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDT
FRAAAREQLAIWGERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVVGKAQADAP
HEVLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADAL
LG

Nucleotide

• Length: 1209 bp

>NTDB_id=1028970 AB4851_RS18350 WP_414450962.1 687120..688328(-) (pilA) [Burkholderia sp. 22PA0099]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCACAAGACGCGCCGGCCGACGAGCAGACCGG
CGCCGAGGCCGCGCCGGACACGCCGCGGCCTGCCGAGCCCCGTGCTGGTGCGACACCGGCCACGCCCGCCATGCCGGCCG
CTCTGGCGCCTGTCACGGCCCAGCCGGCCGCCCCCGTGGCCCCGGCGCCGCAAGTCGCGCCGCCCGTGGCGAGCACGCCT
ACGGCCCCCGCACCGCGAGCAGACAGCACCGCCGTCGAAATCGTCCCGCCGCCCGCGCCCGAACCGGCCGCCAAGAAATC
GTGGATCGCGCGGTTGCGCTCGGGCCTGTCCAAGACGAGCTCGAACCTGACGAACGTGTTCGTCAGCACCAAGATCGACG
AAGACCTCTACGAAGAACTCGAAACCGCGCTGCTGATGTCCGACGCTGGCGTGGACGCCACCGAATACCTGCTCGGCGCG
CTGCGCGAGCGCGTCAAGGCGCAGCGCCTGACCGATCCGCAGCAGGTCAAGACGGCGCTGCGCACGCTGCTCGTCGAATT
GCTCCAGCCGCTCGAGAAATCGCTGATGCTCGGTCGCGCGCAACCGCTCGTGATGATGATCGCGGGCGTCAACGGCGCGG
GCAAGACCACCAGCATCGGCAAGCTGGCCAAGCATCTGCAGAGCTTCGATCAATCGGTGCTGCTGGCCGCCGGCGACACG
TTCCGCGCCGCCGCGCGCGAACAGCTCGCGATCTGGGGCGAGCGCAACAACGTCACGGTAGTGCAGCAGGAAAGCGGCGA
TCCGGCCGCGGTGATCTTCGATGCGGTGGGCGCCGCCCGCGCGCGCAAGATCGACGTGGTGATGGCCGATACGGCCGGCC
GCCTGCCCACGCAGTTGCATCTGATGGAAGAGCTGCGCAAGGTCAAGCGCGTGGTCGGCAAGGCGCAGGCCGACGCACCG
CACGAGGTGCTGCTCGTGATCGACGCAAACACGGGCCAGAACGCGCTCGCACAGGTCAAGGCCTTCGACGACGCACTCGG
CCTGACGGGCCTGATCGTCACCAAGCTCGACGGCACCGCGAAGGGCGGCATCCTGGCCGCGATCGCGCGCCAGCGGCCGG
TGCCGGTGTACTTCATCGGCGTCGGCGAGAAGGTGGAGGACCTGCAACCGTTCAGCGCCGAGGAATTCGCGGACGCGCTG
CTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (121-181)

• SRP54-type protein, GTPase domain (SRP54) (203-402)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.009	100	0.547