Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AB4O89_RS10160 | Genome accession | NZ_CP163039 |
| Coordinates | 2158227..2158607 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain W155 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2153227..2163607
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4O89_RS10130 (AB4O89_10130) | tadA | 2153345..2153848 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| AB4O89_RS10135 (AB4O89_10135) | - | 2153855..2154979 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AB4O89_RS10140 (AB4O89_10140) | ung | 2154976..2155689 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AB4O89_RS10145 (AB4O89_10145) | - | 2155740..2156336 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| AB4O89_RS10150 (AB4O89_10150) | gspK | 2156567..2157526 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| AB4O89_RS10155 (AB4O89_10155) | xcpW | 2157526..2158227 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AB4O89_RS10160 (AB4O89_10160) | xcpV | 2158227..2158607 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AB4O89_RS10165 (AB4O89_10165) | - | 2158597..2159151 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| AB4O89_RS10170 (AB4O89_10170) | - | 2159161..2159769 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AB4O89_RS10175 (AB4O89_10175) | - | 2159807..2160580 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AB4O89_RS10180 (AB4O89_10180) | - | 2160598..2160939 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AB4O89_RS10185 (AB4O89_10185) | - | 2160951..2161931 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| AB4O89_RS10190 (AB4O89_10190) | kdsB | 2161943..2162704 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1028576 AB4O89_RS10160 WP_000836911.1 2158227..2158607(-) (xcpV) [Acinetobacter baumannii strain W155]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1028576 AB4O89_RS10160 WP_000836911.1 2158227..2158607(-) (xcpV) [Acinetobacter baumannii strain W155]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |