Detailed information NTG1028575

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AB4O89_RS10155
• Genome accession: NZ_CP163039
• Coordinates: 2157526..2158227 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain W155
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2152526..2163227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4O89_RS10125 (AB4O89_10125)	-	2152832..2153275 (-)	444	WP_001246675.1	SRPBCC family protein	-
AB4O89_RS10130 (AB4O89_10130)	tadA	2153345..2153848 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
AB4O89_RS10135 (AB4O89_10135)	-	2153855..2154979 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AB4O89_RS10140 (AB4O89_10140)	ung	2154976..2155689 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AB4O89_RS10145 (AB4O89_10145)	-	2155740..2156336 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
AB4O89_RS10150 (AB4O89_10150)	gspK	2156567..2157526 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
AB4O89_RS10155 (AB4O89_10155)	xcpW	2157526..2158227 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AB4O89_RS10160 (AB4O89_10160)	xcpV	2158227..2158607 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AB4O89_RS10165 (AB4O89_10165)	-	2158597..2159151 (-)	555	WP_000841373.1	type II secretion system protein	-
AB4O89_RS10170 (AB4O89_10170)	-	2159161..2159769 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AB4O89_RS10175 (AB4O89_10175)	-	2159807..2160580 (-)	774	WP_000497298.1	TatD family hydrolase	-
AB4O89_RS10180 (AB4O89_10180)	-	2160598..2160939 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AB4O89_RS10185 (AB4O89_10185)	-	2160951..2161931 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
AB4O89_RS10190 (AB4O89_10190)	kdsB	2161943..2162704 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1028575 AB4O89_RS10155 WP_000594589.1 2157526..2158227(-) (xcpW) [Acinetobacter baumannii strain W155]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1028575 AB4O89_RS10155 WP_000594589.1 2157526..2158227(-) (xcpW) [Acinetobacter baumannii strain W155]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996