Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   AB4922_RS10965 Genome accession   NZ_CP162911
Coordinates   2148873..2149676 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus aerius strain KW1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2143873..2154676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4922_RS10950 (AB4922_10950) - 2146089..2146325 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  AB4922_RS10955 (AB4922_10955) - 2146359..2147096 (-) 738 WP_366967574.1 glycerophosphodiester phosphodiesterase -
  AB4922_RS10960 (AB4922_10960) - 2147323..2148423 (-) 1101 WP_007501159.1 Rap family tetratricopeptide repeat protein -
  AB4922_RS10965 (AB4922_10965) spo0A 2148873..2149676 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  AB4922_RS10970 (AB4922_10970) spoIVB 2149960..2151237 (-) 1278 WP_368774519.1 SpoIVB peptidase -
  AB4922_RS10975 (AB4922_10975) recN 2151436..2153169 (-) 1734 WP_368774520.1 DNA repair protein RecN Machinery gene
  AB4922_RS10980 (AB4922_10980) argR 2153204..2153653 (-) 450 WP_007501163.1 transcriptional regulator ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=1028031 AB4922_RS10965 WP_008342226.1 2148873..2149676(-) (spo0A) [Bacillus aerius strain KW1]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1028031 AB4922_RS10965 WP_008342226.1 2148873..2149676(-) (spo0A) [Bacillus aerius strain KW1]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment