Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3456_RS04455 | Genome accession | NZ_CP162632 |
| Coordinates | 962975..963394 (+) | Length | 139 a.a. |
| NCBI ID | WP_017722100.1 | Uniprot ID | A0A418INX2 |
| Organism | Staphylococcus pseudoxylosus strain Hao 2022 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 957975..968394
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3456_RS04425 (AB3456_04425) | atpD | 958002..959414 (+) | 1413 | WP_017722094.1 | F0F1 ATP synthase subunit beta | - |
| AB3456_RS04430 (AB3456_04430) | - | 959434..959838 (+) | 405 | WP_017722095.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3456_RS04435 (AB3456_04435) | - | 960193..960426 (+) | 234 | WP_017722096.1 | DUF1146 family protein | - |
| AB3456_RS04440 (AB3456_04440) | murA | 960534..961799 (+) | 1266 | WP_017722097.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3456_RS04445 (AB3456_04445) | fabZ | 961857..962294 (+) | 438 | WP_017722098.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3456_RS04450 (AB3456_04450) | - | 962344..962784 (-) | 441 | WP_017722099.1 | YwpF-like family protein | - |
| AB3456_RS04455 (AB3456_04455) | ssb | 962975..963394 (+) | 420 | WP_017722100.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3456_RS04460 (AB3456_04460) | - | 963816..964505 (+) | 690 | WP_017722101.1 | transglycosylase family protein | - |
| AB3456_RS04465 (AB3456_04465) | tenA | 964944..965624 (+) | 681 | WP_017722102.1 | thiaminase II | - |
| AB3456_RS04470 (AB3456_04470) | thiD | 965626..966447 (+) | 822 | WP_119603882.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3456_RS04475 (AB3456_04475) | thiM | 966440..967228 (+) | 789 | WP_119603881.1 | hydroxyethylthiazole kinase | - |
| AB3456_RS04480 (AB3456_04480) | thiE | 967231..967869 (+) | 639 | WP_107551575.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16137.58 Da Isoelectric Point: 6.4617
>NTDB_id=1027710 AB3456_RS04455 WP_017722100.1 962975..963394(+) (ssb) [Staphylococcus pseudoxylosus strain Hao 2022]
MINNIVIVGRLTKDPKIYEKEGNKLATMCVAITRNYRDKDQNTICDYLYCKAVGKIANNIELYLNKGSLVGITGQMQSRK
YEKEGQMHFVSELFIETIKFMSPRNKDEISEFHEIFPIEQVCNSTKEKSLQDNEIYEIV
MINNIVIVGRLTKDPKIYEKEGNKLATMCVAITRNYRDKDQNTICDYLYCKAVGKIANNIELYLNKGSLVGITGQMQSRK
YEKEGQMHFVSELFIETIKFMSPRNKDEISEFHEIFPIEQVCNSTKEKSLQDNEIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=1027710 AB3456_RS04455 WP_017722100.1 962975..963394(+) (ssb) [Staphylococcus pseudoxylosus strain Hao 2022]
ATGATTAACAACATTGTCATAGTAGGGAGATTAACCAAAGACCCTAAAATTTATGAGAAGGAGGGGAATAAATTAGCTAC
AATGTGTGTAGCGATAACAAGAAATTATAGAGATAAGGACCAAAATACCATTTGTGATTATCTATATTGTAAGGCAGTTG
GTAAAATAGCTAATAATATCGAACTATATTTAAATAAAGGATCACTTGTGGGAATTACTGGTCAAATGCAATCAAGAAAA
TATGAAAAAGAAGGGCAGATGCATTTTGTATCAGAACTTTTTATCGAAACGATTAAATTTATGTCTCCGAGAAATAAAGA
TGAAATTAGTGAATTTCATGAAATATTCCCTATAGAGCAAGTTTGTAATTCAACTAAAGAAAAAAGTCTACAAGATAATG
AAATATACGAAATTGTATAA
ATGATTAACAACATTGTCATAGTAGGGAGATTAACCAAAGACCCTAAAATTTATGAGAAGGAGGGGAATAAATTAGCTAC
AATGTGTGTAGCGATAACAAGAAATTATAGAGATAAGGACCAAAATACCATTTGTGATTATCTATATTGTAAGGCAGTTG
GTAAAATAGCTAATAATATCGAACTATATTTAAATAAAGGATCACTTGTGGGAATTACTGGTCAAATGCAATCAAGAAAA
TATGAAAAAGAAGGGCAGATGCATTTTGTATCAGAACTTTTTATCGAAACGATTAAATTTATGTCTCCGAGAAATAAAGA
TGAAATTAGTGAATTTCATGAAATATTCCCTATAGAGCAAGTTTGTAATTCAACTAAAGAAAAAAGTCTACAAGATAATG
AAATATACGAAATTGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
65.421 |
76.978 |
0.504 |
| ssb | Staphylococcus aureus MW2 |
64.486 |
76.978 |
0.496 |