Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB3Z07_RS20990 Genome accession   NZ_CP162630
Coordinates   4247102..4249396 (-) Length   764 a.a.
NCBI ID   WP_368657599.1    Uniprot ID   -
Organism   Metabacillus halosaccharovorans strain Hao 2024     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 4242102..4254396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3Z07_RS20950 (AB3Z07_20950) - 4242245..4242667 (+) 423 WP_078433420.1 Na(+)/H(+) antiporter subunit B -
  AB3Z07_RS20955 (AB3Z07_20955) - 4242667..4243008 (+) 342 WP_078431259.1 Na(+)/H(+) antiporter subunit C -
  AB3Z07_RS20960 (AB3Z07_20960) - 4243001..4244479 (+) 1479 WP_368657598.1 Na+/H+ antiporter subunit D -
  AB3Z07_RS20965 (AB3Z07_20965) - 4244485..4244961 (+) 477 WP_026558992.1 Na+/H+ antiporter subunit E -
  AB3Z07_RS20970 (AB3Z07_20970) - 4244963..4245247 (+) 285 WP_026558993.1 Na(+)/H(+) antiporter subunit F1 -
  AB3Z07_RS20975 (AB3Z07_20975) mnhG 4245231..4245587 (+) 357 WP_216776455.1 monovalent cation/H(+) antiporter subunit G -
  AB3Z07_RS20980 (AB3Z07_20980) - 4245634..4246014 (-) 381 WP_251681947.1 hotdog fold thioesterase -
  AB3Z07_RS20985 (AB3Z07_20985) comA 4246334..4246975 (-) 642 WP_251681754.1 response regulator transcription factor Regulator
  AB3Z07_RS20990 (AB3Z07_20990) comP 4247102..4249396 (-) 2295 WP_368657599.1 histidine kinase Regulator
  AB3Z07_RS20995 (AB3Z07_20995) comX 4249416..4249574 (-) 159 WP_368657600.1 competence pheromone ComX -
  AB3Z07_RS21000 (AB3Z07_21000) - 4249577..4250473 (-) 897 WP_368657601.1 polyprenyl synthetase family protein -
  AB3Z07_RS21005 (AB3Z07_21005) - 4250650..4250790 (-) 141 WP_026558999.1 DegQ family regulator -
  AB3Z07_RS21010 (AB3Z07_21010) - 4251108..4251332 (-) 225 WP_368657602.1 hypothetical protein -
  AB3Z07_RS21015 (AB3Z07_21015) - 4251472..4252692 (-) 1221 WP_368657603.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 764 a.a.        Molecular weight: 87777.73 Da        Isoelectric Point: 6.2732

>NTDB_id=1027689 AB3Z07_RS20990 WP_368657599.1 4247102..4249396(-) (comP) [Metabacillus halosaccharovorans strain Hao 2024]
MRNNFNKTFIFFVVLSLIFSIYLITLNINHPYVGANVIINENDEVVIINLEPNSWAEKIGIQIGDVLVEVNGDDPLKHKP
IAEYHVIEQVESFSLSRDGIIKEYSILNETIFSTQGLLIIIIPFTVLTLCLFCSFYIYRSNKRTNLKSANLLNLFLLIIA
VAYISATGSSKGDVISRYVNLCLFLLVPVTYLHFLFQYFVELGKKLYNFNFIRVGYVIVLLNLALEVFREIIGYSSQTNR
IINLISFFIMLVLTFVLKFRGLKKIRYSEQAYIVKVLIVTNVLAFSPFLLFYVLPFIIFQDYVFPPTFLAAFLLLIPFSL
VYQFLATKIYDIEFLLGRIRYYSLLAVIPTFVMVGFMLTLKEADPNFYQIKLSIAIFFCLILVFYIKEIFDFRFRLKRFS
EKYNYQDGIFKYTQSIRKASNLDQVISELKQVIVDVLLVSKAYFIEVDKLKNIRSIDPQAKEADYGAYVSEIQEVSNEIG
KIIEVDKGFIINIGVTDDRSYVLVCLSILNTPILTRDEISWLKTLSFYTNVSLENFLKIDELMQHLQKVETEGENPGWLT
KLLFSIEEKQRSNLAKDLHDSVLQDLVSLKRQCELALAEANDEGLKSQLQNMNSSMTRIIKTTRETCQELRPQLLYDLGL
VKALNKLVAQYQEIVNFDIRLNTGNFTKTLDIDAQLNIYRIVQELLTNAHKHSQATNVLIILVCIKDKIVFHYEDNGVGF
EPSELEDKAESMGLSGISERVKALKGSFSVETSLGNGLKLDIEI

Nucleotide


Download         Length: 2295 bp        

>NTDB_id=1027689 AB3Z07_RS20990 WP_368657599.1 4247102..4249396(-) (comP) [Metabacillus halosaccharovorans strain Hao 2024]
ATGCGAAATAACTTCAATAAAACATTCATTTTCTTCGTTGTTTTAAGTTTAATTTTTTCTATTTATTTAATAACATTGAA
TATAAATCATCCATATGTCGGTGCTAATGTAATAATAAATGAAAATGACGAAGTAGTCATAATTAATCTTGAACCTAATT
CATGGGCTGAAAAAATAGGAATTCAAATAGGTGATGTTCTAGTTGAAGTAAACGGTGATGATCCTCTTAAGCATAAACCT
ATCGCAGAATATCATGTTATTGAACAGGTGGAGTCATTTTCCCTTAGTAGAGACGGAATTATTAAAGAATATTCAATACT
AAATGAAACCATTTTTAGTACACAAGGTTTACTAATAATTATAATTCCTTTTACGGTTTTAACATTGTGTTTATTCTGTA
GTTTTTACATTTATAGATCTAATAAACGAACAAATCTAAAGTCGGCGAATTTATTAAACTTATTTTTGTTAATTATTGCA
GTTGCATATATCAGTGCAACGGGTTCATCAAAAGGTGATGTAATTAGTAGATATGTAAATTTGTGTTTATTTCTATTGGT
GCCTGTTACATACCTACACTTTTTATTTCAATATTTTGTTGAGTTGGGAAAGAAACTGTATAATTTCAACTTTATTAGGG
TGGGTTATGTAATTGTATTACTGAATCTAGCCCTAGAAGTGTTTAGAGAAATAATAGGTTATAGTAGCCAAACTAATAGA
ATTATTAATTTAATATCCTTTTTTATAATGCTGGTTCTTACGTTTGTTTTGAAATTTAGAGGGTTAAAAAAAATTAGATA
TTCTGAGCAAGCATATATAGTGAAAGTGTTAATAGTGACTAATGTATTAGCGTTTTCACCATTTCTATTGTTTTATGTAT
TACCATTTATTATATTCCAAGATTATGTTTTTCCACCAACATTTCTAGCAGCATTCTTATTGCTTATTCCGTTTTCACTC
GTATATCAATTTTTAGCCACTAAAATATATGATATTGAATTCTTGCTTGGCAGAATAAGATACTATTCATTACTAGCGGT
AATACCAACTTTTGTGATGGTAGGATTTATGCTTACCTTAAAAGAAGCTGATCCCAATTTCTATCAGATTAAGCTTTCTA
TCGCTATCTTTTTCTGTCTAATCCTAGTCTTCTACATCAAAGAAATCTTTGACTTCCGTTTTAGGCTTAAGCGATTTTCT
GAGAAATACAACTATCAGGATGGTATCTTCAAATATACTCAAAGCATCCGAAAGGCGAGTAATTTAGATCAGGTTATTTC
TGAGCTGAAGCAGGTTATTGTTGATGTGTTGCTTGTCAGTAAGGCTTATTTTATTGAAGTTGATAAGCTTAAGAATATTA
GATCAATAGATCCACAGGCAAAGGAAGCAGATTATGGAGCATATGTTTCTGAAATCCAAGAAGTTTCTAATGAAATTGGT
AAGATTATTGAAGTGGACAAAGGGTTTATTATTAATATAGGTGTAACAGATGATCGCAGCTATGTGTTAGTGTGTTTATC
TATATTAAATACGCCGATTTTAACTCGGGATGAAATATCATGGTTAAAGACATTATCCTTTTATACGAATGTTTCGTTGG
AAAATTTCTTAAAAATTGATGAGTTGATGCAGCATTTGCAAAAGGTTGAAACAGAAGGGGAAAATCCAGGCTGGTTAACG
AAGCTTTTATTTTCAATTGAGGAAAAACAGCGTTCTAACTTAGCGAAGGATTTGCATGACTCTGTTTTACAAGACTTAGT
CTCATTAAAAAGGCAGTGTGAATTAGCGCTTGCTGAGGCAAATGACGAAGGATTAAAAAGTCAGTTGCAAAACATGAATA
GTAGTATGACACGAATTATTAAAACAACAAGAGAAACCTGCCAGGAATTACGTCCTCAGTTACTTTATGATTTAGGTCTT
GTAAAAGCCTTAAATAAATTAGTAGCTCAATATCAAGAAATTGTGAACTTTGATATCCGATTAAATACAGGAAACTTCAC
AAAGACATTAGATATTGATGCACAGTTGAATATTTATCGAATTGTCCAGGAGTTACTCACAAATGCGCATAAGCATTCAC
AGGCAACCAATGTTCTCATTATTTTAGTTTGTATAAAAGATAAAATCGTTTTTCATTACGAGGATAATGGAGTTGGCTTT
GAGCCTAGTGAATTGGAAGATAAAGCAGAGAGTATGGGGCTTTCAGGTATAAGTGAGCGAGTTAAGGCTCTTAAGGGCTC
TTTTTCTGTTGAAACCTCACTGGGCAATGGTCTAAAATTAGATATTGAAATATAA

Domains


Predicted by InterproScan.

(571-635)

(29-74)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

47.416

100

0.48


Multiple sequence alignment