Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NZAK3_RS05115 Genome accession   NZ_LT009690
Coordinates   1014395..1015381 (+) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NZAK3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1009395..1020381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NZAK3_RS05095 trpS 1009986..1010975 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  NZAK3_RS05100 spxA 1011269..1011664 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  NZAK3_RS05105 mecA 1012035..1012754 (+) 720 WP_001217728.1 adaptor protein MecA -
  NZAK3_RS05110 - 1012908..1014227 (-) 1320 WP_001557163.1 ISL3-like element IS1181 family transposase -
  NZAK3_RS05115 coiA 1014395..1015381 (+) 987 WP_000959282.1 competence protein CoiA Machinery gene
  NZAK3_RS05120 pepF 1015429..1017237 (+) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  NZAK3_RS05125 - 1017716..1019035 (-) 1320 WP_001557163.1 ISL3-like element IS1181 family transposase -
  NZAK3_RS05130 yjbH 1019217..1020023 (-) 807 WP_000896697.1 protease adaptor protein YjbH -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=1027373 NZAK3_RS05115 WP_000959282.1 1014395..1015381(+) (coiA) [Staphylococcus aureus strain NZAK3]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1027373 NZAK3_RS05115 WP_000959282.1 1014395..1015381(+) (coiA) [Staphylococcus aureus strain NZAK3]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterProScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1
  coiA Staphylococcus aureus MW2

97.561

100

0.976