Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4P94_RS08415 Genome accession   NZ_CP162592
Coordinates   1849378..1849785 (+) Length   135 a.a.
NCBI ID   WP_395610168.1    Uniprot ID   -
Organism   Pseudomonas sp. B22129     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1844378..1854785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4P94_RS08385 (AB4P94_08370) - 1844411..1845415 (-) 1005 WP_395610164.1 aspartate carbamoyltransferase catalytic subunit -
  AB4P94_RS08390 (AB4P94_08375) pyrR 1845440..1845946 (-) 507 WP_395610165.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB4P94_RS08395 (AB4P94_08380) ruvX 1846020..1846457 (-) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  AB4P94_RS08400 (AB4P94_08385) - 1846457..1847026 (-) 570 WP_395611311.1 YqgE/AlgH family protein -
  AB4P94_RS08405 (AB4P94_08390) - 1847202..1848107 (-) 906 WP_395610166.1 TonB family protein -
  AB4P94_RS08410 (AB4P94_08395) gshB 1848185..1849138 (-) 954 WP_395610167.1 glutathione synthase -
  AB4P94_RS08415 (AB4P94_08400) pilG 1849378..1849785 (+) 408 WP_395610168.1 twitching motility response regulator PilG Regulator
  AB4P94_RS08420 (AB4P94_08405) pilH 1849832..1850197 (+) 366 WP_014720320.1 twitching motility response regulator PilH -
  AB4P94_RS08425 (AB4P94_08410) - 1850210..1850734 (+) 525 WP_395610169.1 chemotaxis protein CheW -
  AB4P94_RS08430 (AB4P94_08415) - 1850731..1852782 (+) 2052 WP_395610170.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14952.49 Da        Isoelectric Point: 7.3842

>NTDB_id=1027315 AB4P94_RS08415 WP_395610168.1 1849378..1849785(+) (pilG) [Pseudomonas sp. B22129]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1027315 AB4P94_RS08415 WP_395610168.1 1849378..1849785(+) (pilG) [Pseudomonas sp. B22129]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGACTCGAAAACGATCCGTCGCACCGCCGAGACACTGTT
GAAGAACATGGGGTGCGACGTCATCACCGCCATCGACGGTTTCGATGCGCTGGCCCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATTATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAA
TCGATCCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTACGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.291

94.074

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment