Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4P96_RS03835 Genome accession   NZ_CP162589
Coordinates   858268..858675 (+) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas sp. B19125     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 853268..863675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4P96_RS03805 (AB4P96_03805) - 853288..854292 (-) 1005 WP_056857699.1 aspartate carbamoyltransferase catalytic subunit -
  AB4P96_RS03810 (AB4P96_03810) pyrR 854317..854823 (-) 507 WP_017139446.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB4P96_RS03815 (AB4P96_03815) ruvX 854906..855343 (-) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  AB4P96_RS03820 (AB4P96_03820) - 855343..855912 (-) 570 WP_017139445.1 YqgE/AlgH family protein -
  AB4P96_RS03825 (AB4P96_03825) - 856092..856997 (-) 906 WP_200430434.1 energy transducer TonB -
  AB4P96_RS03830 (AB4P96_03830) gshB 857075..858028 (-) 954 WP_099550340.1 glutathione synthase -
  AB4P96_RS03835 (AB4P96_03835) pilG 858268..858675 (+) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  AB4P96_RS03840 (AB4P96_03840) pilH 858722..859087 (+) 366 WP_017139442.1 twitching motility response regulator PilH -
  AB4P96_RS03845 (AB4P96_03845) - 859100..859624 (+) 525 WP_017139441.1 chemotaxis protein CheW -
  AB4P96_RS03850 (AB4P96_03850) - 859621..861672 (+) 2052 WP_017139440.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=1027256 AB4P96_RS03835 WP_010564379.1 858268..858675(+) (pilG) [Pseudomonas sp. B19125]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1027256 AB4P96_RS03835 WP_010564379.1 858268..858675(+) (pilG) [Pseudomonas sp. B19125]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGATGATTCAAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACGTGGGCTGCGATGTGATCACGGCTATCGACGGTTTCGATGCCCTGGCCCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCTTCTAAAGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTTGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCAATCAAGGCTTACGTGCCTGGGTTTGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment