Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AB3473_RS06415 | Genome accession | NZ_CP162537 |
| Coordinates | 1315500..1316474 (+) | Length | 324 a.a. |
| NCBI ID | WP_002507503.1 | Uniprot ID | - |
| Organism | Staphylococcus equorum strain UPB 1351 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1310500..1321474
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3473_RS06385 (AB3473_06385) | - | 1310681..1311220 (+) | 540 | WP_002507497.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| AB3473_RS06390 (AB3473_06390) | - | 1311235..1312692 (+) | 1458 | WP_103170370.1 | rhomboid family intramembrane serine protease | - |
| AB3473_RS06395 (AB3473_06395) | - | 1312676..1312876 (+) | 201 | WP_002512453.1 | YqgQ family protein | - |
| AB3473_RS06400 (AB3473_06400) | - | 1313466..1314452 (+) | 987 | WP_002507500.1 | glucokinase | - |
| AB3473_RS06405 (AB3473_06405) | - | 1314452..1314775 (+) | 324 | WP_002507501.1 | MTH1187 family thiamine-binding protein | - |
| AB3473_RS06410 (AB3473_06410) | - | 1314777..1315400 (+) | 624 | WP_002507502.1 | MBL fold metallo-hydrolase | - |
| AB3473_RS06415 (AB3473_06415) | comGA | 1315500..1316474 (+) | 975 | WP_002507503.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB3473_RS06420 (AB3473_06420) | - | 1316446..1317168 (+) | 723 | WP_398574381.1 | type II secretion system F family protein | - |
| AB3473_RS06425 (AB3473_06425) | - | 1317168..1317512 (+) | 345 | WP_398574382.1 | type II secretion system F family protein | - |
| AB3473_RS06430 (AB3473_06430) | comGC | 1317537..1317854 (+) | 318 | WP_056936206.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB3473_RS06435 (AB3473_06435) | comGD | 1317835..1318278 (+) | 444 | WP_238536966.1 | competence type IV pilus minor pilin ComGD | - |
| AB3473_RS06440 (AB3473_06440) | - | 1318265..1318564 (+) | 300 | WP_002507507.1 | hypothetical protein | - |
| AB3473_RS06445 (AB3473_06445) | comGF | 1318536..1318979 (+) | 444 | WP_002507508.1 | competence type IV pilus minor pilin ComGF | - |
| AB3473_RS06450 (AB3473_06450) | - | 1319186..1319659 (+) | 474 | WP_230456625.1 | shikimate kinase | - |
| AB3473_RS06455 (AB3473_06455) | gcvT | 1319838..1320929 (+) | 1092 | WP_002507510.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37330.45 Da Isoelectric Point: 9.0536
>NTDB_id=1027026 AB3473_RS06415 WP_002507503.1 1315500..1316474(+) (comGA) [Staphylococcus equorum strain UPB 1351]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIQTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEIKQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIQTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEIKQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI
Nucleotide
Download Length: 975 bp
>NTDB_id=1027026 AB3473_RS06415 WP_002507503.1 1315500..1316474(+) (comGA) [Staphylococcus equorum strain UPB 1351]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCAGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGTGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTACTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAAACAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCAGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGTGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTACTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAAACAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
61.111 |
100 |
0.611 |
| comGA | Staphylococcus aureus N315 |
61.111 |
100 |
0.611 |