Detailed information NTG1027001

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AB3469_RS15005
• Genome accession: NZ_CP162532
• Coordinates: 3168387..3169532 (+)
• Length: 381 a.a.
• NCBI ID: WP_396329105.1
• Uniprot ID: -
• Organism: Burkholderia anthina strain LMG 22950
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3163387..3174532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3469_RS14975 (AB3469_14975)	-	3164022..3164627 (+)	606	WP_396329103.1	50S ribosomal protein L25/general stress protein Ctc	-
AB3469_RS14980 (AB3469_14980)	pth	3164748..3165347 (+)	600	WP_044847473.1	aminoacyl-tRNA hydrolase	-
AB3469_RS14985 (AB3469_14985)	hisC	3165477..3166544 (+)	1068	WP_396329104.1	histidinol-phosphate transaminase	-
AB3469_RS14990 (AB3469_14990)	-	3166636..3166902 (-)	267	WP_098550547.1	YfhL family 4Fe-4S dicluster ferredoxin	-
AB3469_RS14995 (AB3469_14995)	coaD	3166962..3167459 (-)	498	WP_014895999.1	pantetheine-phosphate adenylyltransferase	-
AB3469_RS15000 (AB3469_15000)	rsmD	3167571..3168185 (-)	615	WP_098550546.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AB3469_RS15005 (AB3469_15005)	pilA	3168387..3169532 (+)	1146	WP_396329105.1	signal recognition particle-docking protein FtsY	Machinery gene
AB3469_RS15010 (AB3469_15010)	maiA	3169610..3170254 (-)	645	WP_175781398.1	maleylacetoacetate isomerase	-
AB3469_RS15015 (AB3469_15015)	ybiB	3170455..3171429 (+)	975	WP_396329106.1	DNA-binding protein YbiB	-
AB3469_RS15020 (AB3469_15020)	leuA	3171811..3173457 (+)	1647	WP_396329107.1	2-isopropylmalate synthase	-
AB3469_RS15025 (AB3469_15025)	-	3173601..3173984 (-)	384	WP_098550541.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40546.38 Da
• Isoelectric Point: 4.6866

>NTDB_id=1027001 AB3469_RS15005 WP_396329105.1 3168387..3169532(+) (pilA) [Burkholderia anthina strain LMG 22950]
MFSFFKRFKKTQESDSAESQLADAPQPDETLEAPEAPAPEAPPAPAQPAAPAVVMTVTPTNDGSDEVVEAVEIVPPPTQD
ATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALH
DLLVELLAPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNVTVV
QQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQVKA
FDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAAEFADALLD

Nucleotide

• Length: 1146 bp

>NTDB_id=1027001 AB3469_RS15005 WP_396329105.1 3168387..3169532(+) (pilA) [Burkholderia anthina strain LMG 22950]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGTCCGACTCCGCGGAATCGCAATTGGCCGACGCGCCGCAACC
GGACGAGACGCTCGAAGCGCCTGAAGCGCCCGCGCCCGAGGCCCCGCCGGCACCCGCGCAGCCGGCCGCGCCGGCCGTCG
TGATGACGGTCACGCCGACCAACGACGGCAGCGACGAGGTCGTCGAAGCGGTCGAGATCGTGCCGCCGCCCACGCAGGAT
GCGACCGCGAAGAAGTCGTGGCTCGCCCGCCTGAAAACCGGGCTCGCAAAGACGGGCTCGAGCATCACCGGCGTGTTCGT
CAACACGAAGATCGACGAGGATCTGTACGAAGAGCTCGAAACCGCGCTGCTGATGTCCGACGCCGGCGTCGATGCGACCG
AGTACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCGTGGGCCGGCTGACCGACCCGCAGCAGGTGAAGAGCGCGCTGCAC
GACCTGCTCGTCGAACTGCTGGCGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGATGATGATCAC
CGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGTCGGTGCTGC
TGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAACGCAACAACGTGACGGTCGTG
CAGCAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTCAGTGCCGCGCGCGCGCGCAAGATCGACGTGATGAT
GGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGGGTGATCTCGAAGG
CGCACGACGGCGCGCCGCACGAGGTGCTGCTCGTGATCGACGCGAACACGGGCCAGAACGCGCTCACGCAGGTGAAGGCA
TTCGACGATGCGCTCGGCCTCACCGGCCTGATCGTCACGAAACTGGACGGCACCGCGAAGGGCGGCATTCTCGCCGCGAT
CGCGCGGCAACGTCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTGGAAGACCTGCAGCCGTTCAGCGCAGCGG
AATTCGCGGACGCGCTGCTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (99-161)

• SRP54-type protein, GTPase domain (SRP54) (182-380)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.518	100	0.575