Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB3464_RS14665 Genome accession   NZ_CP162519
Coordinates   3300027..3300434 (-) Length   135 a.a.
NCBI ID   WP_010444906.1    Uniprot ID   A0A1H6M674
Organism   Pseudomonas asplenii strain UPB 526     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3295027..3305434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3464_RS14650 (AB3464_14565) - 3296950..3299007 (-) 2058 WP_010444900.1 methyl-accepting chemotaxis protein -
  AB3464_RS14655 (AB3464_14570) - 3299065..3299604 (-) 540 WP_010444902.1 chemotaxis protein CheW -
  AB3464_RS14660 (AB3464_14575) pilH 3299617..3299982 (-) 366 WP_010444904.1 twitching motility response regulator PilH -
  AB3464_RS14665 (AB3464_14580) pilG 3300027..3300434 (-) 408 WP_010444906.1 twitching motility response regulator PilG Regulator
  AB3464_RS14670 (AB3464_14585) gshB 3300671..3301624 (+) 954 WP_010444908.1 glutathione synthase -
  AB3464_RS14675 (AB3464_14590) - 3301702..3302601 (+) 900 WP_397459759.1 TonB family protein -
  AB3464_RS14680 (AB3464_14595) - 3302651..3303220 (+) 570 WP_010444913.1 YqgE/AlgH family protein -
  AB3464_RS14685 (AB3464_14600) ruvX 3303220..3303660 (+) 441 WP_010444914.1 Holliday junction resolvase RuvX -
  AB3464_RS14690 (AB3464_14605) pyrR 3303729..3304244 (+) 516 WP_019361594.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB3464_RS14695 (AB3464_14610) - 3304260..3305264 (+) 1005 WP_010444917.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14849.39 Da        Isoelectric Point: 7.9336

>NTDB_id=1026843 AB3464_RS14665 WP_010444906.1 3300027..3300434(-) (pilG) [Pseudomonas asplenii strain UPB 526]
MEQHSTALKVMVIDDSKTIRRTAETLLKHVGCEVITAVDGFEALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSREELLAAIKAHVPGFAAIEQVL

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1026843 AB3464_RS14665 WP_010444906.1 3300027..3300434(-) (pilG) [Pseudomonas asplenii strain UPB 526]
ATGGAACAGCATTCCACAGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACGATTCGCCGCACCGCCGAGACGCTGCT
CAAGCACGTCGGCTGCGAAGTCATCACCGCCGTCGACGGTTTCGAGGCGTTGGCCAAGATCGCCGATCATCACCCGGGGA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCCCTGATCAAGAACAACCGTGCGTTCAAG
TCGACGCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGTTCTGATCAGTT
TTTGACCAAGCCTTTCAGCCGGGAAGAACTGCTGGCGGCGATCAAGGCTCATGTCCCGGGTTTCGCGGCAATAGAACAAG
TACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H6M674

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

40.945

94.074

0.385

Multiple sequence alignment