Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   DQL00_RS04765 Genome accession   NZ_LS483523
Coordinates   869314..870024 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain 4041STDY6836169     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 864314..875024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL00_RS04740 amiD 864819..865745 (+) 927 WP_000103700.1 oligopeptide ABC transporter permease OppC Regulator
  DQL00_RS04745 amiE 865754..866821 (+) 1068 WP_000159562.1 ABC transporter ATP-binding protein Regulator
  DQL00_RS04750 - 866832..867758 (+) 927 WP_001291294.1 ATP-binding cassette domain-containing protein -
  DQL00_RS04755 - 867833..869159 (-) 1327 Protein_845 ISL3 family transposase -
  DQL00_RS04765 treR 869314..870024 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  DQL00_RS04770 treP 870209..872176 (+) 1968 WP_000514332.1 PTS system trehalose-specific EIIBC component -
  DQL00_RS04780 treC 872354..873979 (+) 1626 WP_000171222.1 alpha,alpha-phosphotrehalase -
  DQL00_RS04785 - 874235..874483 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=1026323 DQL00_RS04765 WP_000760673.1 869314..870024(-) (treR) [Streptococcus pneumoniae strain 4041STDY6836169]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=1026323 DQL00_RS04765 WP_000760673.1 869314..870024(-) (treR) [Streptococcus pneumoniae strain 4041STDY6836169]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment