Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3433_RS13800 | Genome accession | NZ_CP162469 |
| Coordinates | 2782657..2783052 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain TUM20820 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2777657..2788052
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3433_RS13770 (AB3433_13770) | - | 2778916..2779320 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3433_RS13775 (AB3433_13775) | - | 2779658..2779750 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| AB3433_RS13780 (AB3433_13780) | - | 2779882..2780115 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3433_RS13785 (AB3433_13785) | murA | 2780226..2781491 (+) | 1266 | WP_261921486.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3433_RS13790 (AB3433_13790) | fabZ | 2781525..2781965 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3433_RS13795 (AB3433_13795) | - | 2782023..2782463 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3433_RS13800 (AB3433_13800) | ssb | 2782657..2783052 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3433_RS13805 (AB3433_13805) | sceD | 2783441..2784136 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB3433_RS13810 (AB3433_13810) | tenA | 2784660..2785349 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3433_RS13815 (AB3433_13815) | thiD | 2785342..2786172 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3433_RS13820 (AB3433_13820) | thiM | 2786156..2786956 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| AB3433_RS13825 (AB3433_13825) | thiE | 2786949..2787590 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=1026233 AB3433_RS13800 WP_000932692.1 2782657..2783052(+) (ssb) [Staphylococcus aureus strain TUM20820]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1026233 AB3433_RS13800 WP_000932692.1 2782657..2783052(+) (ssb) [Staphylococcus aureus strain TUM20820]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |