Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3423_RS05750 | Genome accession | NZ_CP162461 |
| Coordinates | 1185816..1186211 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain TUM20913 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1180816..1191211
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3423_RS05720 (AB3423_05720) | - | 1182075..1182479 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3423_RS05725 (AB3423_05725) | - | 1182817..1182909 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| AB3423_RS05730 (AB3423_05730) | - | 1183041..1183274 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3423_RS05735 (AB3423_05735) | murA | 1183385..1184650 (+) | 1266 | WP_261921486.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3423_RS05740 (AB3423_05740) | fabZ | 1184684..1185124 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3423_RS05745 (AB3423_05745) | - | 1185182..1185622 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3423_RS05750 (AB3423_05750) | ssb | 1185816..1186211 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3423_RS05755 (AB3423_05755) | sceD | 1186600..1187295 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB3423_RS05760 (AB3423_05760) | tenA | 1187819..1188508 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3423_RS05765 (AB3423_05765) | thiD | 1188501..1189331 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3423_RS05770 (AB3423_05770) | thiM | 1189315..1190115 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| AB3423_RS05775 (AB3423_05775) | thiE | 1190108..1190749 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=1026025 AB3423_RS05750 WP_000932692.1 1185816..1186211(+) (ssb) [Staphylococcus aureus strain TUM20913]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1026025 AB3423_RS05750 WP_000932692.1 1185816..1186211(+) (ssb) [Staphylococcus aureus strain TUM20913]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |