Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3447_RS13120 | Genome accession | NZ_CP162456 |
| Coordinates | 2654306..2654701 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain TUM20915 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2649306..2659701
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3447_RS13090 (AB3447_13090) | - | 2650565..2650969 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3447_RS13095 (AB3447_13095) | - | 2651307..2651399 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| AB3447_RS13100 (AB3447_13100) | - | 2651531..2651764 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3447_RS13105 (AB3447_13105) | murA | 2651875..2653140 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3447_RS13110 (AB3447_13110) | fabZ | 2653174..2653614 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3447_RS13115 (AB3447_13115) | - | 2653672..2654112 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3447_RS13120 (AB3447_13120) | ssb | 2654306..2654701 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3447_RS13125 (AB3447_13125) | sceD | 2655090..2655785 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB3447_RS13130 (AB3447_13130) | tenA | 2656309..2656998 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3447_RS13135 (AB3447_13135) | thiD | 2656991..2657821 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3447_RS13140 (AB3447_13140) | thiM | 2657805..2658605 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| AB3447_RS13145 (AB3447_13145) | thiE | 2658598..2659239 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=1025967 AB3447_RS13120 WP_000932692.1 2654306..2654701(+) (ssb) [Staphylococcus aureus strain TUM20915]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1025967 AB3447_RS13120 WP_000932692.1 2654306..2654701(+) (ssb) [Staphylococcus aureus strain TUM20915]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |