Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3441_RS05785 | Genome accession | NZ_CP162444 |
| Coordinates | 1174671..1175066 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22182 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1169671..1180066
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3441_RS05755 (AB3441_05755) | - | 1170929..1171333 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3441_RS05760 (AB3441_05760) | - | 1171671..1171763 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| AB3441_RS05765 (AB3441_05765) | - | 1171895..1172128 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3441_RS05770 (AB3441_05770) | murA | 1172239..1173504 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3441_RS05775 (AB3441_05775) | fabZ | 1173538..1173978 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3441_RS05780 (AB3441_05780) | - | 1174037..1174477 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3441_RS05785 (AB3441_05785) | ssb | 1174671..1175066 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3441_RS05790 (AB3441_05790) | sceD | 1175455..1176150 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB3441_RS05795 (AB3441_05795) | tenA | 1176536..1177225 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3441_RS05800 (AB3441_05800) | thiD | 1177218..1178048 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3441_RS05805 (AB3441_05805) | thiM | 1178032..1178823 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| AB3441_RS05810 (AB3441_05810) | thiE | 1178825..1179466 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1025675 AB3441_RS05785 WP_000932694.1 1174671..1175066(+) (ssb) [Staphylococcus aureus strain TUM22182]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1025675 AB3441_RS05785 WP_000932694.1 1174671..1175066(+) (ssb) [Staphylococcus aureus strain TUM22182]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |