Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3438_RS05740 | Genome accession | NZ_CP162442 |
| Coordinates | 1187132..1187527 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain TUM22188 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1182132..1192527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3438_RS05710 (AB3438_05710) | - | 1183392..1183796 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3438_RS05715 (AB3438_05715) | - | 1184133..1184225 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| AB3438_RS05720 (AB3438_05720) | - | 1184357..1184590 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3438_RS05725 (AB3438_05725) | murA | 1184701..1185966 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3438_RS05730 (AB3438_05730) | fabZ | 1186000..1186440 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3438_RS05735 (AB3438_05735) | - | 1186498..1186938 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3438_RS05740 (AB3438_05740) | ssb | 1187132..1187527 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3438_RS05745 (AB3438_05745) | sceD | 1187916..1188611 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB3438_RS05750 (AB3438_05750) | tenA | 1189135..1189824 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3438_RS05755 (AB3438_05755) | thiD | 1189817..1190647 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3438_RS05760 (AB3438_05760) | thiM | 1190631..1191431 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| AB3438_RS05765 (AB3438_05765) | thiE | 1191424..1192065 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=1025631 AB3438_RS05740 WP_000932692.1 1187132..1187527(+) (ssb) [Staphylococcus aureus strain TUM22188]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1025631 AB3438_RS05740 WP_000932692.1 1187132..1187527(+) (ssb) [Staphylococcus aureus strain TUM22188]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |