Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3446_RS14545 | Genome accession | NZ_CP162440 |
| Coordinates | 2884830..2885225 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22457 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2879830..2890225
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3446_RS14515 (AB3446_14515) | - | 2881088..2881492 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3446_RS14520 (AB3446_14520) | - | 2881830..2881922 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| AB3446_RS14525 (AB3446_14525) | - | 2882054..2882287 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3446_RS14530 (AB3446_14530) | murA | 2882398..2883663 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3446_RS14535 (AB3446_14535) | fabZ | 2883697..2884137 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3446_RS14540 (AB3446_14540) | - | 2884196..2884636 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3446_RS14545 (AB3446_14545) | ssb | 2884830..2885225 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3446_RS14550 (AB3446_14550) | sceD | 2885614..2886309 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| AB3446_RS14555 (AB3446_14555) | tenA | 2886696..2887385 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3446_RS14560 (AB3446_14560) | thiD | 2887378..2888208 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3446_RS14565 (AB3446_14565) | thiM | 2888192..2888983 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| AB3446_RS14570 (AB3446_14570) | thiE | 2888985..2889626 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1025621 AB3446_RS14545 WP_000932694.1 2884830..2885225(+) (ssb) [Staphylococcus aureus strain TUM22457]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1025621 AB3446_RS14545 WP_000932694.1 2884830..2885225(+) (ssb) [Staphylococcus aureus strain TUM22457]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |