Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DQN71_RS08895 Genome accession   NZ_LS483471
Coordinates   1692867..1693553 (-) Length   228 a.a.
NCBI ID   WP_015605639.1    Uniprot ID   A0ABN4B825
Organism   Streptococcus cristatus strain NCTC13807     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1687867..1698553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN71_RS08875 (NCTC13807_01693) - 1688189..1690189 (-) 2001 WP_015605635.1 ABC transporter permease -
  DQN71_RS08880 (NCTC13807_01694) - 1690170..1690949 (-) 780 WP_015605636.1 ABC transporter ATP-binding protein -
  DQN71_RS08885 (NCTC13807_01695) - 1691033..1691791 (-) 759 WP_015605637.1 TraX family protein -
  DQN71_RS08890 (NCTC13807_01696) - 1691903..1692883 (-) 981 WP_015605638.1 sensor histidine kinase -
  DQN71_RS08895 (NCTC13807_01697) braR 1692867..1693553 (-) 687 WP_015605639.1 response regulator transcription factor Regulator
  DQN71_RS08900 (NCTC13807_01698) - 1693759..1695018 (+) 1260 WP_015605640.1 NRAMP family divalent metal transporter -
  DQN71_RS08905 (NCTC13807_01699) - 1695138..1696343 (+) 1206 WP_041826913.1 DUF2974 domain-containing protein -
  DQN71_RS08910 (NCTC13807_01700) - 1696588..1696983 (-) 396 WP_015605642.1 DUF805 domain-containing protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26310.51 Da        Isoelectric Point: 4.9774

>NTDB_id=1025580 DQN71_RS08895 WP_015605639.1 1692867..1693553(-) (braR) [Streptococcus cristatus strain NCTC13807]
MHKILLVEDDAVIRQMIKKMLEQWGYQVVAIEDFMQVLTTFVKEEPQLVLMDIGLPLFNGYHWCQEIRKISTVPIMFLSS
RDQSMDIVMAINMGADDYVTKPFDNNVFLAKVQGLLRRSYEFGTDQSLLEYQGVILNLKSMDLVYEGELVTLTKNEFQIL
RVLFEHSGSIVARDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEHGLKYFIETKKGIGYGLTNGHAG

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1025580 DQN71_RS08895 WP_015605639.1 1692867..1693553(-) (braR) [Streptococcus cristatus strain NCTC13807]
ATGCACAAGATTTTACTGGTCGAGGATGATGCGGTTATCCGTCAAATGATCAAAAAAATGCTGGAGCAGTGGGGCTATCA
GGTTGTGGCGATTGAGGATTTCATGCAGGTTTTGACGACCTTTGTCAAGGAGGAGCCCCAGCTGGTGCTGATGGATATTG
GTCTGCCCCTCTTTAACGGCTACCATTGGTGCCAGGAAATTCGGAAGATTTCGACGGTGCCAATTATGTTTCTATCTTCG
CGCGACCAGTCCATGGATATCGTCATGGCCATCAATATGGGCGCAGATGACTATGTGACCAAGCCTTTTGATAATAATGT
CTTTCTGGCAAAAGTTCAAGGCCTGCTGAGGCGATCGTATGAGTTTGGAACGGATCAAAGCCTTTTGGAATATCAGGGCG
TGATTTTAAATCTTAAGTCCATGGATTTGGTCTATGAGGGCGAGCTTGTAACGTTGACCAAGAATGAATTTCAGATCTTG
CGGGTGCTCTTTGAGCATTCCGGTAGTATCGTGGCGCGTGATGACTTGATGAAGGAGCTCTGGAACAGTGATTTCTTTAT
AGATGACAATACCTTGTCTGTCAATGTTGCCCGTTTGCGCAAGAAGCTGGAGGAGCACGGTCTGAAGTATTTCATTGAGA
CGAAAAAAGGGATAGGGTACGGTTTGACCAATGGACATGCAGGATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.165

95.614

0.461
  micA Streptococcus pneumoniae Cp1015

35.776

100

0.364