Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3426_RS13200 | Genome accession | NZ_CP162433 |
| Coordinates | 2679873..2680268 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22701 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2674873..2685268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3426_RS13170 (AB3426_13170) | - | 2676131..2676535 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3426_RS13175 (AB3426_13175) | - | 2676873..2676965 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| AB3426_RS13180 (AB3426_13180) | - | 2677097..2677330 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3426_RS13185 (AB3426_13185) | murA | 2677441..2678706 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3426_RS13190 (AB3426_13190) | fabZ | 2678740..2679180 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3426_RS13195 (AB3426_13195) | - | 2679239..2679679 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3426_RS13200 (AB3426_13200) | ssb | 2679873..2680268 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3426_RS13205 (AB3426_13205) | sceD | 2680657..2681352 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| AB3426_RS13210 (AB3426_13210) | tenA | 2681739..2682428 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3426_RS13215 (AB3426_13215) | thiD | 2682421..2683251 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3426_RS13220 (AB3426_13220) | thiM | 2683235..2684026 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| AB3426_RS13225 (AB3426_13225) | thiE | 2684028..2684669 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1025443 AB3426_RS13200 WP_000932694.1 2679873..2680268(+) (ssb) [Staphylococcus aureus strain TUM22701]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1025443 AB3426_RS13200 WP_000932694.1 2679873..2680268(+) (ssb) [Staphylococcus aureus strain TUM22701]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |