Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3425_RS05795 | Genome accession | NZ_CP162429 |
| Coordinates | 1179959..1180354 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22705 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1174959..1185354
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3425_RS05765 (AB3425_05765) | - | 1176217..1176621 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3425_RS05770 (AB3425_05770) | - | 1176959..1177051 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| AB3425_RS05775 (AB3425_05775) | - | 1177183..1177416 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3425_RS05780 (AB3425_05780) | murA | 1177527..1178792 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3425_RS05785 (AB3425_05785) | fabZ | 1178826..1179266 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3425_RS05790 (AB3425_05790) | - | 1179325..1179765 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3425_RS05795 (AB3425_05795) | ssb | 1179959..1180354 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3425_RS05800 (AB3425_05800) | sceD | 1180743..1181438 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB3425_RS05805 (AB3425_05805) | tenA | 1181824..1182513 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3425_RS05810 (AB3425_05810) | thiD | 1182506..1183336 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3425_RS05815 (AB3425_05815) | thiM | 1183320..1184111 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| AB3425_RS05820 (AB3425_05820) | thiE | 1184113..1184754 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1025319 AB3425_RS05795 WP_000932694.1 1179959..1180354(+) (ssb) [Staphylococcus aureus strain TUM22705]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1025319 AB3425_RS05795 WP_000932694.1 1179959..1180354(+) (ssb) [Staphylococcus aureus strain TUM22705]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |