Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3445_RS13735 | Genome accession | NZ_CP162422 |
| Coordinates | 2760692..2761087 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22723 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2755692..2766087
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3445_RS13705 (AB3445_13710) | - | 2756949..2757353 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3445_RS13710 (AB3445_13715) | - | 2757692..2757784 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| AB3445_RS13715 (AB3445_13720) | - | 2757916..2758149 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3445_RS13720 (AB3445_13725) | murA | 2758260..2759525 (+) | 1266 | WP_000358000.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3445_RS13725 (AB3445_13730) | fabZ | 2759559..2759999 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3445_RS13730 (AB3445_13735) | - | 2760058..2760498 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3445_RS13735 (AB3445_13740) | ssb | 2760692..2761087 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3445_RS13740 (AB3445_13745) | sceD | 2761476..2762171 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB3445_RS13745 (AB3445_13750) | tenA | 2762557..2763246 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3445_RS13750 (AB3445_13755) | thiD | 2763239..2764069 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3445_RS13755 (AB3445_13760) | thiM | 2764053..2764844 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| AB3445_RS13760 (AB3445_13765) | thiE | 2764846..2765487 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1025223 AB3445_RS13735 WP_000932694.1 2760692..2761087(+) (ssb) [Staphylococcus aureus strain TUM22723]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1025223 AB3445_RS13735 WP_000932694.1 2760692..2761087(+) (ssb) [Staphylococcus aureus strain TUM22723]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |