Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AB3453_RS02060 | Genome accession | NZ_CP162420 |
| Coordinates | 395664..396059 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain TUM22741 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 390664..401059
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3453_RS02030 (AB3453_02030) | - | 391924..392328 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| AB3453_RS02035 (AB3453_02035) | - | 392665..392757 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| AB3453_RS02040 (AB3453_02040) | - | 392889..393122 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| AB3453_RS02045 (AB3453_02045) | murA | 393233..394498 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| AB3453_RS02050 (AB3453_02050) | fabZ | 394532..394972 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AB3453_RS02055 (AB3453_02055) | - | 395030..395470 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| AB3453_RS02060 (AB3453_02060) | ssb | 395664..396059 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3453_RS02065 (AB3453_02065) | sceD | 396448..397143 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| AB3453_RS02070 (AB3453_02070) | tenA | 397667..398356 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| AB3453_RS02075 (AB3453_02075) | thiD | 398349..399179 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AB3453_RS02080 (AB3453_02080) | thiM | 399163..399963 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| AB3453_RS02085 (AB3453_02085) | thiE | 399956..400597 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=1025142 AB3453_RS02060 WP_000932692.1 395664..396059(+) (ssb) [Staphylococcus aureus strain TUM22741]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1025142 AB3453_RS02060 WP_000932692.1 395664..396059(+) (ssb) [Staphylococcus aureus strain TUM22741]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |