Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   AB1F57_RS13070 Genome accession   NZ_CP162268
Coordinates   2593235..2594011 (+) Length   258 a.a.
NCBI ID   WP_167786136.1    Uniprot ID   -
Organism   Streptococcus sp. ZY1909104     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2588235..2599011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F57_RS13025 (AB1F57_13025) - 2588306..2588572 (+) 267 WP_141600169.1 hypothetical protein -
  AB1F57_RS13030 (AB1F57_13030) - 2588569..2588904 (+) 336 WP_367985868.1 DUF771 domain-containing protein -
  AB1F57_RS13035 (AB1F57_13035) - 2588967..2590088 (+) 1122 WP_171997235.1 site-specific integrase -
  AB1F57_RS13055 (AB1F57_13055) - 2590606..2591283 (-) 678 WP_105138554.1 YoaK family protein -
  AB1F57_RS13060 (AB1F57_13060) rlmH 2591312..2591791 (-) 480 WP_105138553.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AB1F57_RS13065 (AB1F57_13065) htrA 2591983..2593167 (+) 1185 WP_167786135.1 trypsin-like peptidase domain-containing protein Regulator
  AB1F57_RS13070 (AB1F57_13070) spo0J 2593235..2594011 (+) 777 WP_167786136.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29629.39 Da        Isoelectric Point: 9.8704

>NTDB_id=1024722 AB1F57_RS13070 WP_167786136.1 2593235..2594011(+) (spo0J) [Streptococcus sp. ZY1909104]
MEELKKIAIKDIQTNPFQPRKHFNQEKLLELAQSIRENGIIQPIIVRKSSLIGYELLAGERRLRASQLAGLEEIPALVKE
LSDDQLMLQAIIENLQRSDLNPIEEAASYQKLIEKGLTHDEIAQIMGKSRPYISNLLRLLSLSNRTITAIETGEISQGHA
RLLIGLPESKQVYWIERIQQEQLSVRWLENALKKKKKKRQAPPKTNLFLKEQETELQKLLGTMVTIRQQKSGQGKLSLSF
DSNEEFERIINTLKKLCD

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1024722 AB1F57_RS13070 WP_167786136.1 2593235..2594011(+) (spo0J) [Streptococcus sp. ZY1909104]
ATGGAAGAATTAAAAAAGATAGCGATTAAGGATATTCAAACAAATCCTTTTCAGCCACGAAAACATTTTAACCAAGAAAA
ATTATTGGAACTAGCCCAGTCTATTCGAGAAAATGGAATTATCCAACCGATTATCGTCCGAAAATCCTCTCTCATAGGCT
ATGAATTATTAGCTGGGGAACGACGTTTACGAGCCAGTCAATTAGCCGGTCTAGAAGAAATTCCAGCCCTTGTAAAGGAA
TTATCCGATGACCAGCTCATGCTGCAGGCTATTATCGAAAACCTCCAACGGTCGGACTTGAATCCCATTGAAGAAGCAGC
ATCCTATCAAAAATTGATTGAAAAGGGGCTGACCCACGATGAAATTGCTCAAATTATGGGCAAATCCCGCCCTTATATTT
CCAATCTTCTGCGTTTGCTGAGCCTCAGTAACAGGACCATTACCGCCATTGAAACCGGAGAAATCAGCCAGGGGCATGCT
CGCCTCTTAATCGGTCTTCCTGAATCGAAACAAGTCTACTGGATAGAGCGTATCCAACAGGAGCAATTAAGTGTTCGTTG
GCTGGAAAATGCTTTGAAAAAGAAAAAGAAGAAAAGGCAAGCCCCACCGAAAACAAATCTCTTTTTGAAGGAGCAAGAAA
CTGAATTACAGAAACTCCTGGGAACCATGGTCACGATTAGACAGCAGAAATCTGGTCAGGGGAAGCTTAGCCTATCCTTT
GATTCCAACGAAGAATTCGAAAGAATTATCAACACCTTAAAAAAATTGTGTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.118

98.45

0.543


Multiple sequence alignment