Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | DQN28_RS06510 | Genome accession | NZ_LS483430 |
| Coordinates | 1286024..1287058 (-) | Length | 344 a.a. |
| NCBI ID | WP_002988663.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC12044 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1281024..1292058
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN28_RS06475 (NCTC12044_01289) | - | 1281800..1282102 (-) | 303 | WP_002983488.1 | YlxQ-related RNA-binding protein | - |
| DQN28_RS06480 (NCTC12044_01290) | rnpM | 1282095..1282391 (-) | 297 | WP_002983486.1 | RNase P modulator RnpM | - |
| DQN28_RS06485 (NCTC12044_01291) | nusA | 1282407..1283564 (-) | 1158 | WP_002994325.1 | transcription termination factor NusA | - |
| DQN28_RS06490 (NCTC12044_01292) | rimP | 1283739..1284275 (-) | 537 | WP_002988815.1 | ribosome maturation factor RimP | - |
| DQN28_RS06500 (NCTC12044_01294) | trmB | 1284534..1285169 (-) | 636 | WP_002983387.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| DQN28_RS06505 (NCTC12044_01295) | ccrZ | 1285169..1285960 (-) | 792 | WP_002983385.1 | cell cycle regulator CcrZ | - |
| DQN28_RS06510 (NCTC12044_01296) | pptB | 1286024..1287058 (-) | 1035 | WP_002988663.1 | ABC transporter permease | Regulator |
| DQN28_RS06515 (NCTC12044_01297) | pptA | 1287061..1287786 (-) | 726 | WP_002983379.1 | ABC transporter ATP-binding protein | Regulator |
| DQN28_RS06520 (NCTC12044_01298) | - | 1287858..1288277 (+) | 420 | WP_002983376.1 | HIT family protein | - |
| DQN28_RS06525 (NCTC12044_01299) | - | 1288274..1288630 (+) | 357 | WP_002988657.1 | hypothetical protein | - |
| DQN28_RS06530 (NCTC12044_01300) | brpA | 1288741..1290024 (-) | 1284 | WP_002994335.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| DQN28_RS06535 (NCTC12044_01301) | - | 1290033..1290557 (-) | 525 | WP_002994338.1 | GNAT family N-acetyltransferase | - |
| DQN28_RS06540 (NCTC12044_01302) | tsaE | 1290532..1290993 (-) | 462 | WP_111686335.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 40241.47 Da Isoelectric Point: 10.4168
>NTDB_id=1024480 DQN28_RS06510 WP_002988663.1 1286024..1287058(-) (pptB) [Streptococcus pyogenes strain NCTC12044]
MKALFLKRRQNFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID
MKALFLKRRQNFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID
Nucleotide
Download Length: 1035 bp
>NTDB_id=1024480 DQN28_RS06510 WP_002988663.1 1286024..1287058(-) (pptB) [Streptococcus pyogenes strain NCTC12044]
ATGAAAGCATTATTTCTGAAACGCCGTCAAAACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA
ATGAAAGCATTATTTCTGAAACGCCGTCAAAACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus thermophilus LMD-9 |
43.023 |
100 |
0.43 |
| pptB | Streptococcus salivarius strain HSISS4 |
42.733 |
100 |
0.427 |