Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGE   Type   Machinery gene
Locus tag   QUR21_RS08025 Genome accession   NZ_CP162115
Coordinates   1648989..1649288 (-) Length   99 a.a.
NCBI ID   WP_000844410.1    Uniprot ID   A0A7R6NZL1
Organism   Staphylococcus aureus strain BSN12     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1643989..1654288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUR21_RS08000 (QUR21_08015) gcvPA 1645201..1646547 (-) 1347 WP_000019691.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA -
  QUR21_RS08005 (QUR21_08020) gcvT 1646567..1647658 (-) 1092 WP_000093349.1 glycine cleavage system aminomethyltransferase GcvT -
  QUR21_RS08010 (QUR21_08025) - 1647817..1648341 (-) 525 WP_001015120.1 shikimate kinase -
  QUR21_RS08015 (QUR21_08030) - 1648331..1648477 (-) 147 WP_001792109.1 hypothetical protein -
  QUR21_RS08020 (QUR21_08035) comGF 1648574..1649071 (-) 498 WP_001788897.1 competence type IV pilus minor pilin ComGF Machinery gene
  QUR21_RS08025 (QUR21_08040) comGE 1648989..1649288 (-) 300 WP_000844410.1 hypothetical protein Machinery gene
  QUR21_RS08030 (QUR21_08045) comGD 1649275..1649721 (-) 447 WP_001788899.1 competence type IV pilus minor pilin ComGD Machinery gene
  QUR21_RS08035 (QUR21_08050) comGC 1649699..1650010 (-) 312 WP_000472256.1 competence type IV pilus major pilin ComGC Machinery gene
  QUR21_RS08040 (QUR21_08055) comGB 1650024..1651094 (-) 1071 WP_000776422.1 competence type IV pilus assembly protein ComGB Machinery gene
  QUR21_RS08045 (QUR21_08060) comGA 1651066..1652040 (-) 975 WP_000697220.1 competence type IV pilus ATPase ComGA Machinery gene
  QUR21_RS08050 (QUR21_08065) - 1652092..1652715 (-) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  QUR21_RS08055 (QUR21_08070) - 1652712..1653041 (-) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  QUR21_RS08060 (QUR21_08075) - 1653041..1654027 (-) 987 WP_000161311.1 ROK family glucokinase -
  QUR21_RS08065 (QUR21_08080) - 1654024..1654227 (-) 204 WP_000087561.1 YqgQ family protein -

Sequence


Protein


Download         Length: 99 a.a.        Molecular weight: 11079.18 Da        Isoelectric Point: 9.9215

>NTDB_id=1024151 QUR21_RS08025 WP_000844410.1 1648989..1649288(-) (comGE) [Staphylococcus aureus strain BSN12]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY

Nucleotide


Download         Length: 300 bp        

>NTDB_id=1024151 QUR21_RS08025 WP_000844410.1 1648989..1649288(-) (comGE) [Staphylococcus aureus strain BSN12]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7R6NZL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Staphylococcus aureus N315

100

100

1

  comGE Staphylococcus aureus MW2

85.965

100

0.99


Multiple sequence alignment