Detailed information NTG1024034

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AB2S62_RS02710
• Genome accession: NZ_CP162100
• Coordinates: 559960..563346 (-)
• Length: 1128 a.a.
• NCBI ID: WP_367988184.1
• Uniprot ID: -
• Organism: Vibrio sp. NTOU-M3
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 554960..568346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2S62_RS02695 (AB2S62_02455)	erpA	555106..555447 (+)	342	WP_367988181.1	iron-sulfur cluster insertion protein ErpA	-
AB2S62_RS02700 (AB2S62_02460)	-	555640..556722 (+)	1083	WP_367988182.1	efflux RND transporter periplasmic adaptor subunit	-
AB2S62_RS02705 (AB2S62_02465)	-	556731..559856 (+)	3126	WP_367988183.1	efflux RND transporter permease subunit	-
AB2S62_RS02710 (AB2S62_02470)	chiS	559960..563346 (-)	3387	WP_367988184.1	response regulator	Regulator
AB2S62_RS02715 (AB2S62_02475)	rsmC	563540..564562 (-)	1023	WP_367988185.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AB2S62_RS02720 (AB2S62_02480)	-	564642..565727 (-)	1086	WP_367988186.1	AI-2E family transporter	-
AB2S62_RS02725 (AB2S62_02485)	-	566146..567408 (+)	1263	WP_367988187.1	hypothetical protein	-
AB2S62_RS02730 (AB2S62_02490)	-	567418..567828 (+)	411	WP_367988189.1	hypothetical protein	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127389.11 Da
• Isoelectric Point: 6.2132

>NTDB_id=1024034 AB2S62_RS02710 WP_367988184.1 559960..563346(-) (chiS) [Vibrio sp. NTOU-M3]
MFKLYRKQRFKRLQNTLMLAFLVLSITPLTVIALFFLQSHSKDLQEQSTSHLVSVRDSKKQQVVDYLFSKESEVMGFVRS
ELATASGGHFYGLVNAFRNLGLTIEEARQYAQKRYIPGSGDKIKTSILPQSTEYNASERYRLLHKRYHWAYLELLKRSDF
DDILLVDRDGNVTYSIYKYDNYGTNLLNGKYKDANLGKTFQKLKVQVAEKRRSNEDYTPVVISDFSPEQGKMVAWLGAPI
IQQGYLHSYAMFRLPNNAITKLIADSNQTSQMRTLLVGSDHRSRTLAHEQTDIDKSAEVINLALQGSTAFGTYTNTVGED
TIAAYSPISFKGENWALVVEVPEKEAFARVHQLETLFIFAMLVAIVIVVIASHYLSNFITSPLLKLTWAAEKVSAGDLEA
DMINTDRKDEIGRLAVSFERMQRSIREKMQLIKEQNVELESNLKLIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALVSGANGPITADHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIQTSAVDLASATRLVLELSSHLLGSKPIRI
INQVASETVWVSADPQRLEQVLYNLVGNAIKYTSEGKIVISANVVDDKIRVQVVDTGQGIPAEQLEHIFEPLIQAGHDTS
RYRQGAGLGLSISRQLIELMDGSLYVSSQPMVGTTFSFTLPLASEEQIIQASHSEASHFRAPDVGDIEIQETNCLPENPD
GPLLLVADDEPVNLRVLDSFLRLEGYRVRTAKDGHEALDIIEQEKPELLLLDIMMPGLSGYQVCTTLREKYDHSQLPVIM
LTALNQPDDRIRGFEAGANDYLTKPFNKRELAARITAHLTASKAELRRIENQQLQNELKQRAIVEASLLETQGRLLEQLE
SAPEAIVCIRDDNKIRFVNEAASRLFRRSPEQLKRSRADEIIAPKFLNVEQEHYCGNIDIYVEDVRQHVSADILRLPEGA
DLKLMYIFNVGGGVNVARIHNLETAIEALSSFAFEGDKAKLQQLRELGGEFTRLADKVSGESQSKHDIMREVLVDAMTSA
LNYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLDYILEHCKEQGPERTHIESLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1024034 AB2S62_RS02710 WP_367988184.1 559960..563346(-) (chiS) [Vibrio sp. NTOU-M3]
ATGTTCAAGTTGTATAGAAAACAAAGATTTAAACGTTTGCAGAACACCCTAATGCTGGCGTTTTTAGTTTTGAGCATAAC
CCCACTGACTGTCATTGCTCTGTTCTTTTTGCAGTCACACAGTAAAGATCTGCAAGAACAAAGTACCTCCCACCTTGTTT
CGGTTCGCGATAGCAAAAAACAACAAGTCGTTGACTATCTATTTTCAAAAGAGTCAGAGGTAATGGGATTTGTGCGCTCT
GAGCTTGCAACCGCAAGTGGTGGGCATTTTTATGGCTTAGTCAATGCGTTCAGGAACTTAGGACTTACCATTGAAGAAGC
TCGTCAATACGCACAAAAACGTTATATTCCCGGCTCTGGCGATAAAATTAAAACGTCAATTTTGCCCCAATCAACAGAGT
ACAATGCCTCAGAGCGGTATCGTCTGCTGCACAAACGTTATCATTGGGCCTATTTAGAGCTATTAAAGCGCTCTGATTTT
GACGACATCTTGCTAGTTGACCGTGACGGCAACGTGACCTACTCCATTTATAAATACGATAACTACGGTACTAACCTGCT
TAATGGTAAATATAAAGATGCCAACTTAGGTAAAACTTTCCAAAAGCTCAAAGTTCAAGTTGCAGAGAAACGCAGAAGTA
ATGAAGACTACACGCCAGTGGTGATTTCAGACTTCTCTCCAGAACAAGGCAAAATGGTTGCTTGGCTTGGTGCCCCAATC
ATTCAACAAGGCTACCTACACAGTTACGCAATGTTCCGTTTGCCAAATAACGCCATCACTAAACTGATCGCAGACAGTAA
CCAAACATCGCAAATGCGCACCTTGTTGGTCGGAAGTGATCATCGCTCCAGAACATTAGCCCATGAGCAAACGGATATCG
ACAAAAGTGCAGAGGTGATCAATCTGGCTCTCCAAGGCTCCACCGCCTTTGGCACTTATACCAATACCGTTGGTGAAGAT
ACGATTGCAGCGTACAGTCCAATTTCCTTTAAGGGTGAGAATTGGGCTTTAGTTGTTGAGGTGCCAGAAAAAGAAGCATT
TGCCCGCGTGCATCAGCTTGAAACCCTCTTCATTTTCGCAATGTTGGTCGCTATTGTTATCGTTGTGATCGCCTCCCATT
ATCTCTCGAATTTCATTACCTCCCCACTTCTCAAACTCACTTGGGCGGCGGAAAAGGTCTCCGCGGGTGATCTTGAAGCG
GATATGATCAACACCGATCGCAAAGATGAAATTGGCCGCCTAGCGGTCAGTTTTGAGCGTATGCAACGCTCTATTCGTGA
GAAAATGCAGCTAATTAAAGAGCAAAATGTGGAGCTTGAAAGCAACCTCAAGCTGATCCAGAAACAAAATGAAGAGCTGC
AATTAGCAAACAAACTCAAAGACGAATTTCTTGCAACCACATCTCATGAGCTAAGAACGCCATTACACGGCATGGTTGGG
ATCGCTGAAGCTTTAGTCTCTGGAGCAAATGGCCCAATCACGGCAGATCATAAGTATCAACTCGACATTATTATCAGTAG
TGGCCAACGTCTCGCAACGCTCGTTGATGACCTGTTGGATTACCATAAAATGCGTTATGGTAACTTGGATATTCAAACAA
GTGCCGTTGACCTTGCGAGTGCCACACGCTTGGTATTGGAACTTTCTTCTCACCTTCTTGGCAGCAAGCCTATACGTATT
ATCAACCAAGTTGCTAGCGAGACCGTTTGGGTTTCTGCCGATCCGCAACGCTTAGAGCAGGTGCTGTATAACCTAGTTGG
TAACGCGATTAAATACACTAGCGAAGGAAAAATTGTTATTTCAGCAAACGTTGTTGATGACAAGATCCGCGTACAAGTGG
TTGATACTGGCCAAGGTATACCAGCCGAGCAACTCGAACATATTTTTGAACCATTAATCCAAGCGGGTCATGATACCAGC
CGCTACCGTCAAGGCGCAGGGCTTGGACTTTCAATTAGCCGACAACTGATTGAACTGATGGACGGCTCTCTTTATGTCAG
TAGCCAACCCATGGTTGGAACCACCTTTAGCTTTACCCTTCCTCTAGCGAGCGAAGAACAAATCATTCAAGCAAGCCACA
GTGAAGCCTCGCACTTTCGAGCTCCCGATGTTGGTGATATCGAAATCCAAGAAACGAATTGCCTACCTGAAAATCCTGAT
GGTCCATTATTGCTGGTAGCAGATGATGAACCAGTCAATTTAAGAGTTTTGGACAGTTTCTTGCGTCTTGAAGGATACCG
CGTTCGCACTGCGAAAGATGGTCATGAGGCGCTCGATATCATTGAACAAGAGAAACCTGAGCTGCTTCTGTTAGACATCA
TGATGCCCGGACTCAGCGGCTATCAGGTCTGTACGACCTTACGTGAAAAATACGATCACTCTCAATTGCCAGTTATCATG
CTCACGGCTCTAAACCAGCCGGATGATCGCATTCGTGGTTTTGAAGCAGGGGCGAATGATTACCTCACAAAACCGTTTAA
TAAGCGTGAACTTGCCGCTCGTATCACCGCTCACCTGACAGCCAGTAAGGCAGAACTACGACGTATTGAAAATCAACAAC
TGCAAAACGAGTTGAAACAACGCGCTATCGTAGAAGCCAGCTTGCTTGAAACGCAAGGCAGACTGCTAGAGCAACTCGAG
TCCGCCCCTGAAGCGATTGTTTGTATCCGAGACGACAATAAGATTCGATTTGTTAACGAGGCTGCATCGCGCCTATTCCG
CCGTAGTCCTGAGCAGCTTAAACGGTCACGAGCGGATGAAATCATTGCGCCCAAGTTCCTCAATGTCGAGCAAGAACACT
ACTGCGGCAACATCGATATTTACGTTGAAGATGTGCGCCAACATGTCTCTGCCGATATACTCAGACTGCCTGAAGGCGCA
GACCTGAAATTAATGTACATCTTTAATGTTGGTGGTGGGGTTAATGTTGCGCGCATCCATAATTTAGAAACCGCTATTGA
AGCACTGTCTAGTTTTGCTTTTGAAGGAGACAAAGCGAAATTACAACAACTGAGAGAGCTAGGGGGAGAATTTACCCGCC
TTGCCGATAAGGTTTCCGGAGAAAGCCAGTCTAAACACGACATCATGCGTGAAGTCTTGGTTGATGCAATGACCAGCGCT
CTCAATTACTGGGAAAGCGTCACTGGGCAAAGTAAATTTGCTTTTGCTGAACAAAGCGGACTGTGGCGCGTGTATCTTGA
TCGAAGTACGCTTCAAACTCGAACGTTAGATAAATACTTACGGGTCGAGACACTTCCTAAAACGCCACGTTGGCGAACCG
TATTGAGTTCATTGGACTACATCCTTGAACACTGTAAAGAGCAAGGTCCTGAGCGCACACATATCGAGTCTTTAAGGGAT
AAGCTTCAGCATCTTCTCACTAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (725-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	80.053	100	0.801