Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB2J53_RS07145 Genome accession   NZ_CP162020
Coordinates   1355417..1355605 (+) Length   62 a.a.
NCBI ID   WP_048010971.1    Uniprot ID   A0A0J5VNI6
Organism   Cytobacillus firmus strain A4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1350417..1360605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2J53_RS07125 (AB2J53_07125) - 1352308..1352499 (-) 192 WP_048010975.1 DUF2929 family protein -
  AB2J53_RS07130 (AB2J53_07130) - 1352678..1353415 (+) 738 WP_197214640.1 alpha/beta hydrolase -
  AB2J53_RS07135 (AB2J53_07135) - 1353494..1354321 (+) 828 WP_368298339.1 hypothetical protein -
  AB2J53_RS07140 (AB2J53_07140) med 1354431..1355387 (+) 957 WP_197214642.1 BMP family ABC transporter substrate-binding protein Regulator
  AB2J53_RS07145 (AB2J53_07145) comZ 1355417..1355605 (+) 189 WP_048010971.1 ComZ family protein Regulator
  AB2J53_RS07150 (AB2J53_07150) - 1355663..1356049 (-) 387 WP_197214643.1 hypothetical protein -
  AB2J53_RS07155 (AB2J53_07155) - 1356264..1357196 (+) 933 WP_197214644.1 beta-ketoacyl-ACP synthase III -
  AB2J53_RS07160 (AB2J53_07160) fabF 1357494..1358732 (+) 1239 WP_368298340.1 beta-ketoacyl-ACP synthase II -
  AB2J53_RS07165 (AB2J53_07165) - 1358971..1359636 (+) 666 WP_197214645.1 DUF2268 domain-containing putative Zn-dependent protease -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7268.43 Da        Isoelectric Point: 3.9646

>NTDB_id=1023612 AB2J53_RS07145 WP_048010971.1 1355417..1355605(+) (comZ) [Cytobacillus firmus strain A4]
MNEKNMEFMQIAMKYLPEAKQQLDEAGIELSMEMIQPFMNLFIKVMNEAYEMGKTDALNESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1023612 AB2J53_RS07145 WP_048010971.1 1355417..1355605(+) (comZ) [Cytobacillus firmus strain A4]
ATGAACGAAAAAAACATGGAATTCATGCAAATCGCAATGAAATACTTGCCAGAAGCCAAACAGCAGCTTGACGAAGCAGG
CATCGAACTATCCATGGAAATGATCCAGCCATTCATGAACCTATTCATCAAAGTCATGAACGAAGCCTATGAAATGGGCA
AAACGGATGCTTTGAATGAGAGTGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J5VNI6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

98.387

0.71

Multiple sequence alignment