Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   AB2J53_RS05710 Genome accession   NZ_CP162020
Coordinates   1080561..1081364 (+) Length   267 a.a.
NCBI ID   WP_159344664.1    Uniprot ID   A0A800NBG3
Organism   Cytobacillus firmus strain A4     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 1075561..1086364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2J53_RS05680 (AB2J53_05680) - 1076379..1077047 (-) 669 WP_197214458.1 VWA domain-containing protein -
  AB2J53_RS05685 (AB2J53_05685) - 1077122..1078183 (-) 1062 WP_197214459.1 M20 family metallopeptidase -
  AB2J53_RS05690 (AB2J53_05690) - 1078510..1079013 (+) 504 WP_048011779.1 DoxX family protein -
  AB2J53_RS05695 (AB2J53_05695) - 1079069..1079257 (-) 189 WP_048011767.1 YfhD family protein -
  AB2J53_RS05700 (AB2J53_05700) - 1079351..1079476 (-) 126 WP_081757217.1 YfhE family protein -
  AB2J53_RS05705 (AB2J53_05705) - 1079551..1080456 (-) 906 WP_197214460.1 TIGR01777 family oxidoreductase -
  AB2J53_RS05710 (AB2J53_05710) recX 1080561..1081364 (+) 804 WP_159344664.1 recombination regulator RecX Regulator
  AB2J53_RS05715 (AB2J53_05715) - 1081384..1082055 (-) 672 WP_197214462.1 SDR family oxidoreductase -
  AB2J53_RS05720 (AB2J53_05720) - 1082233..1082562 (+) 330 WP_197214463.1 YfhH family protein -
  AB2J53_RS05725 (AB2J53_05725) - 1082620..1082778 (-) 159 WP_009335831.1 YpzG family protein -
  AB2J53_RS05730 (AB2J53_05730) - 1082798..1082968 (-) 171 WP_048011772.1 small, acid-soluble spore protein K -
  AB2J53_RS05735 (AB2J53_05735) - 1083096..1083365 (+) 270 WP_368298289.1 YfhJ family protein -
  AB2J53_RS05740 (AB2J53_05740) - 1083624..1084604 (-) 981 WP_197214465.1 metal-dependent hydrolase -
  AB2J53_RS05745 (AB2J53_05745) mutY 1084811..1085905 (+) 1095 WP_368298290.1 A/G-specific adenine glycosylase -
  AB2J53_RS05750 (AB2J53_05750) - 1085945..1086169 (-) 225 WP_048011776.1 hypothetical protein -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 31623.07 Da        Isoelectric Point: 5.2339

>NTDB_id=1023604 AB2J53_RS05710 WP_159344664.1 1080561..1081364(+) (recX) [Cytobacillus firmus strain A4]
MPTITKITVQKKNTDRYNIYMDYGKGEEYAFSVDEDVLIKHQLKKGMELDEFSLNEIGYQDDIRKAYNRAIHYLSRRMRS
ETEVRKHLAEKEVEEPVIQEVIHKLYDYHFLNDEEFAAAFVRTQMNTSDKGKGLIRTELKEKGISPQLIEMALEEYPRDA
ELAAAIRLCEKYSKKYARDSSKILKQKLEQMLMRKGFNFDIIQEAVTETEIDKEEDEELAALRFQAEKAKKKYANLPEFE
YMQKMKQALFRKGFSFDLIEQFLSEEE

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1023604 AB2J53_RS05710 WP_159344664.1 1080561..1081364(+) (recX) [Cytobacillus firmus strain A4]
ATGCCGACTATTACGAAAATCACAGTTCAGAAAAAAAACACAGACCGCTACAATATATATATGGATTATGGGAAAGGTGA
AGAATATGCATTTAGTGTGGATGAAGATGTTTTAATTAAGCATCAGCTAAAAAAGGGAATGGAGCTTGATGAATTCTCTT
TAAATGAAATTGGCTATCAGGATGATATCCGGAAAGCCTATAACAGGGCTATTCATTATTTATCCAGAAGAATGCGCTCA
GAAACCGAAGTCCGCAAACATTTAGCTGAAAAAGAAGTGGAAGAACCGGTTATTCAGGAAGTTATCCACAAATTGTATGA
TTACCATTTTTTAAATGATGAAGAATTTGCAGCAGCTTTTGTGCGTACACAAATGAACACATCAGATAAAGGTAAAGGCC
TGATCCGCACAGAACTAAAGGAAAAAGGGATTTCCCCTCAATTAATCGAAATGGCATTGGAGGAATATCCAAGGGATGCT
GAGTTAGCTGCCGCTATAAGGCTGTGTGAAAAATATTCAAAGAAATATGCCCGTGATTCATCCAAAATCCTTAAGCAAAA
GCTGGAACAGATGTTAATGCGTAAAGGCTTTAATTTCGACATCATTCAAGAAGCTGTAACTGAAACGGAGATTGATAAAG
AAGAGGATGAAGAACTGGCTGCCCTGAGGTTCCAGGCGGAAAAAGCGAAGAAGAAATATGCAAACCTTCCTGAGTTCGAA
TATATGCAAAAAATGAAGCAAGCCTTGTTCAGAAAAGGTTTTTCTTTTGATTTGATAGAGCAATTTTTAAGTGAAGAAGA
ATAA

Domains


Predicted by InterproScan.

(88-208)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A800NBG3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

50.562

100

0.506


Multiple sequence alignment