Detailed information NTG1023493

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: AB3F25_RS07205
• Genome accession: NZ_CP162010
• Coordinates: 1552621..1553808 (+)
• Length: 395 a.a.
• NCBI ID: WP_373603179.1
• Uniprot ID: -
• Organism: Aggregatibacter sp. HMT-949 strain W10649
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1547621..1558808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3F25_RS07190 (AB3F25_07190)	leuC	1547681..1549090 (-)	1410	WP_373603176.1	3-isopropylmalate dehydratase large subunit	-
AB3F25_RS07195 (AB3F25_07195)	leuB	1549291..1550367 (-)	1077	WP_373603177.1	3-isopropylmalate dehydrogenase	-
AB3F25_RS07200 (AB3F25_07200)	leuA	1550544..1552091 (-)	1548	WP_373603178.1	2-isopropylmalate synthase	-
AB3F25_RS07205 (AB3F25_07205)	dprA	1552621..1553808 (+)	1188	WP_373603179.1	DNA-processing protein DprA	Machinery gene
AB3F25_RS07210 (AB3F25_07210)	yaaA	1553876..1554652 (+)	777	WP_373603180.1	peroxide stress protein YaaA	-
AB3F25_RS07215 (AB3F25_07215)	-	1554645..1555226 (+)	582	WP_373603181.1	hypothetical protein	-
AB3F25_RS07220 (AB3F25_07220)	pfkA	1555343..1556308 (+)	966	WP_373603182.1	6-phosphofructokinase	-
AB3F25_RS07225 (AB3F25_07225)	yceD	1556500..1557024 (+)	525	WP_373603183.1	23S rRNA accumulation protein YceD	-
AB3F25_RS07230 (AB3F25_07230)	rpmF	1557047..1557217 (+)	171	WP_005544470.1	50S ribosomal protein L32	-
AB3F25_RS07235 (AB3F25_07235)	plsX	1557238..1558266 (+)	1029	WP_373603184.1	phosphate acyltransferase PlsX	-

Sequence

Protein

• Length: 395 a.a.
• Molecular weight: 43596.74 Da
• Isoelectric Point: 5.6807

>NTDB_id=1023493 AB3F25_RS07205 WP_373603179.1 1552621..1553808(+) (dprA) [Aggregatibacter sp. HMT-949 strain W10649]
MTQTQATEILLRLLQVPKLGSVGVYNILSNIKLTDFLNYDDVMLRQIGWTDIQIQRWFKPCNQYIDPALEWATKEGNYLI
NYFSSDYPYILKCTSGFPPLLFVQGSIAALSQRQIAMVGSRYCSNYGEAWAKYFATELVLAGFAITSGLALGIDGYCHQA
ALETGGQTIAVLGSGLNRLYPQKHRSLAQRILDANGALISEFLPDQPPIPENFPRRNRIISGLSVGTLVIEATEKSGSLI
TARYALEQNREVFALPGNLQSEFSRGCHQLIKQGALLVENVKDILDTLDEHPTHAQAKIDFDKTAVATRNSAPASRYSGG
ISPSNAVLKSTSNAPAPSAIRPNHPELYARIGYTPISVDELAQEFNLSVDVLLVQLLDLELQDLIMSENGLYQRI

Nucleotide

• Length: 1188 bp

>NTDB_id=1023493 AB3F25_RS07205 WP_373603179.1 1552621..1553808(+) (dprA) [Aggregatibacter sp. HMT-949 strain W10649]
ATGACTCAAACTCAAGCAACAGAAATTTTGCTTCGTCTATTGCAAGTGCCGAAACTGGGTAGCGTGGGAGTTTATAACAT
TTTATCCAATATCAAATTGACTGATTTTTTAAATTATGATGATGTGATGCTACGTCAAATAGGTTGGACTGACATACAAA
TACAACGTTGGTTTAAGCCCTGTAACCAATATATTGATCCCGCATTGGAGTGGGCGACAAAAGAAGGTAATTATCTGATT
AACTATTTTTCATCCGATTATCCTTACATTTTAAAATGCACCAGCGGTTTTCCCCCTTTATTATTTGTACAAGGTAGTAT
AGCAGCACTTTCCCAACGCCAAATCGCCATGGTCGGTAGTCGTTATTGCTCGAATTACGGCGAAGCTTGGGCGAAATATT
TTGCGACTGAACTCGTCCTAGCCGGTTTTGCGATTACCAGCGGATTGGCGCTCGGTATCGATGGGTATTGCCATCAAGCC
GCATTGGAAACGGGCGGACAAACTATTGCAGTGCTGGGCAGTGGGCTCAATCGACTTTATCCTCAGAAACACCGTTCACT
GGCACAACGTATTTTGGACGCAAACGGTGCTTTAATTTCAGAGTTTTTACCGGATCAGCCACCGATACCGGAAAATTTTC
CCCGTCGCAATCGCATCATCAGTGGGCTTTCCGTCGGTACTTTAGTGATCGAAGCAACCGAAAAAAGCGGTTCGTTGATC
ACCGCCCGTTACGCCTTGGAACAAAATCGCGAAGTGTTCGCGCTGCCTGGTAACCTGCAAAGCGAATTCAGTCGTGGCTG
CCATCAATTGATTAAACAGGGCGCCTTATTGGTGGAAAACGTGAAAGATATTTTGGATACATTAGATGAACATCCCACGC
ATGCCCAAGCCAAAATTGATTTTGATAAAACCGCAGTCGCAACTCGCAATTCTGCGCCTGCTTCGCGTTATTCCGGCGGA
ATTTCACCTTCCAATGCGGTGCTAAAAAGCACCTCCAACGCACCGGCACCTTCTGCCATACGCCCGAACCATCCGGAACT
TTACGCGCGTATCGGTTATACGCCGATTAGTGTGGACGAATTGGCGCAGGAATTTAATTTAAGTGTTGATGTGTTGCTGG
TGCAACTACTGGATTTGGAATTACAAGATTTAATTATGAGCGAAAACGGACTTTATCAGCGCATATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (334-389)

• DNA recombination-mediator protein A (DNA_processg_A) (73-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	66.324	98.481	0.653
dprA	Glaesserella parasuis strain SC1401	50.964	91.899	0.468
dprA	Vibrio campbellii strain DS40M4	42.597	97.468	0.415