Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AB3G51_RS09920 | Genome accession | NZ_CP161992 |
| Coordinates | 2107205..2107585 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain SIMBA034 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2102205..2112585
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3G51_RS09890 (AB3G51_09890) | tadA | 2102323..2102826 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| AB3G51_RS09895 (AB3G51_09895) | - | 2102833..2103957 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AB3G51_RS09900 (AB3G51_09900) | ung | 2103954..2104667 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AB3G51_RS09905 (AB3G51_09905) | - | 2104718..2105314 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| AB3G51_RS09910 (AB3G51_09910) | gspK | 2105545..2106504 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| AB3G51_RS09915 (AB3G51_09915) | xcpW | 2106504..2107205 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AB3G51_RS09920 (AB3G51_09920) | xcpV | 2107205..2107585 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AB3G51_RS09925 (AB3G51_09925) | - | 2107575..2108129 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| AB3G51_RS09930 (AB3G51_09930) | - | 2108139..2108747 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AB3G51_RS09935 (AB3G51_09935) | - | 2108785..2109558 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AB3G51_RS09940 (AB3G51_09940) | - | 2109576..2109917 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AB3G51_RS09945 (AB3G51_09945) | - | 2109929..2110909 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| AB3G51_RS09950 (AB3G51_09950) | kdsB | 2110921..2111682 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1023289 AB3G51_RS09920 WP_000836911.1 2107205..2107585(-) (xcpV) [Acinetobacter baumannii strain SIMBA034]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1023289 AB3G51_RS09920 WP_000836911.1 2107205..2107585(-) (xcpV) [Acinetobacter baumannii strain SIMBA034]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |