Detailed information NTG1023288

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AB3G51_RS09915
• Genome accession: NZ_CP161992
• Coordinates: 2106504..2107205 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SIMBA034
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2101504..2112205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3G51_RS09885 (AB3G51_09885)	-	2101810..2102253 (-)	444	WP_001246675.1	SRPBCC family protein	-
AB3G51_RS09890 (AB3G51_09890)	tadA	2102323..2102826 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
AB3G51_RS09895 (AB3G51_09895)	-	2102833..2103957 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AB3G51_RS09900 (AB3G51_09900)	ung	2103954..2104667 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AB3G51_RS09905 (AB3G51_09905)	-	2104718..2105314 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
AB3G51_RS09910 (AB3G51_09910)	gspK	2105545..2106504 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
AB3G51_RS09915 (AB3G51_09915)	xcpW	2106504..2107205 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AB3G51_RS09920 (AB3G51_09920)	xcpV	2107205..2107585 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AB3G51_RS09925 (AB3G51_09925)	-	2107575..2108129 (-)	555	WP_000841373.1	type II secretion system protein	-
AB3G51_RS09930 (AB3G51_09930)	-	2108139..2108747 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AB3G51_RS09935 (AB3G51_09935)	-	2108785..2109558 (-)	774	WP_000497298.1	TatD family hydrolase	-
AB3G51_RS09940 (AB3G51_09940)	-	2109576..2109917 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AB3G51_RS09945 (AB3G51_09945)	-	2109929..2110909 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
AB3G51_RS09950 (AB3G51_09950)	kdsB	2110921..2111682 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1023288 AB3G51_RS09915 WP_000594589.1 2106504..2107205(-) (xcpW) [Acinetobacter baumannii strain SIMBA034]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1023288 AB3G51_RS09915 WP_000594589.1 2106504..2107205(-) (xcpW) [Acinetobacter baumannii strain SIMBA034]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996