Detailed information NTG1023253

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AB3G50_RS16245
• Genome accession: NZ_CP161989
• Coordinates: 3404256..3404738 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046421.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SIMBA028
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3399256..3409738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3G50_RS16210 (AB3G50_16210)	-	3399364..3400398 (+)	1035	WP_001189446.1	lipase secretion chaperone	-
AB3G50_RS16215 (AB3G50_16215)	-	3400513..3401454 (+)	942	WP_085916958.1	triacylglycerol lipase	-
AB3G50_RS16220 (AB3G50_16220)	rplS	3401506..3401874 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
AB3G50_RS16225 (AB3G50_16225)	trmD	3402082..3402822 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AB3G50_RS16230 (AB3G50_16230)	rimM	3402868..3403416 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
AB3G50_RS16235 (AB3G50_16235)	rpsP	3403436..3403687 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
AB3G50_RS16240 (AB3G50_16240)	pilE	3403834..3404259 (-)	426	WP_000788337.1	type IV pilin protein	Machinery gene
AB3G50_RS16245 (AB3G50_16245)	pilY2	3404256..3404738 (-)	483	WP_001046421.1	type IV pilin protein	Machinery gene
AB3G50_RS16250 (AB3G50_16250)	pilY1	3404751..3408605 (-)	3855	WP_000768944.1	PilC/PilY family type IV pilus protein	Machinery gene
AB3G50_RS16255 (AB3G50_16255)	pilX	3408617..3409435 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17563.78 Da
• Isoelectric Point: 8.4834

>NTDB_id=1023253 AB3G50_RS16245 WP_001046421.1 3404256..3404738(-) (pilY2) [Acinetobacter baumannii strain SIMBA028]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1023253 AB3G50_RS16245 WP_001046421.1 3404256..3404738(-) (pilY2) [Acinetobacter baumannii strain SIMBA028]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-135)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	38.953	100	0.419