Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AB3G49_RS08075 | Genome accession | NZ_CP161986 |
| Coordinates | 1696406..1696786 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836909.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain SIMBA003 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1691406..1701786
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3G49_RS08045 (AB3G49_08045) | kdsB | 1692309..1693070 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AB3G49_RS08050 (AB3G49_08050) | - | 1693082..1694062 (+) | 981 | WP_001075419.1 | DNA polymerase III subunit delta' | - |
| AB3G49_RS08055 (AB3G49_08055) | - | 1694074..1694415 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AB3G49_RS08060 (AB3G49_08060) | - | 1694433..1695206 (+) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| AB3G49_RS08065 (AB3G49_08065) | - | 1695244..1695852 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AB3G49_RS08070 (AB3G49_08070) | - | 1695862..1696416 (+) | 555 | WP_000841372.1 | type II secretion system protein | - |
| AB3G49_RS08075 (AB3G49_08075) | xcpV | 1696406..1696786 (+) | 381 | WP_000836909.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AB3G49_RS08080 (AB3G49_08080) | xcpW | 1696786..1697487 (+) | 702 | WP_000594588.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AB3G49_RS08085 (AB3G49_08085) | gspK | 1697487..1698446 (+) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| AB3G49_RS08090 (AB3G49_08090) | - | 1698676..1699272 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| AB3G49_RS08095 (AB3G49_08095) | ung | 1699323..1700036 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| AB3G49_RS08100 (AB3G49_08100) | - | 1700033..1701157 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AB3G49_RS08105 (AB3G49_08105) | tadA | 1701164..1701667 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13991.24 Da Isoelectric Point: 9.8004
>NTDB_id=1023196 AB3G49_RS08075 WP_000836909.1 1696406..1696786(+) (xcpV) [Acinetobacter baumannii strain SIMBA003]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1023196 AB3G49_RS08075 WP_000836909.1 1696406..1696786(+) (xcpV) [Acinetobacter baumannii strain SIMBA003]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |