Detailed information NTG1023197

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AB3G49_RS08080
• Genome accession: NZ_CP161986
• Coordinates: 1696786..1697487 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594588.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SIMBA003
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1691786..1702487

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3G49_RS08045 (AB3G49_08045)	kdsB	1692309..1693070 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AB3G49_RS08050 (AB3G49_08050)	-	1693082..1694062 (+)	981	WP_001075419.1	DNA polymerase III subunit delta'	-
AB3G49_RS08055 (AB3G49_08055)	-	1694074..1694415 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
AB3G49_RS08060 (AB3G49_08060)	-	1694433..1695206 (+)	774	WP_000497301.1	TatD family hydrolase	-
AB3G49_RS08065 (AB3G49_08065)	-	1695244..1695852 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AB3G49_RS08070 (AB3G49_08070)	-	1695862..1696416 (+)	555	WP_000841372.1	type II secretion system protein	-
AB3G49_RS08075 (AB3G49_08075)	xcpV	1696406..1696786 (+)	381	WP_000836909.1	type II secretion system minor pseudopilin GspI	Machinery gene
AB3G49_RS08080 (AB3G49_08080)	xcpW	1696786..1697487 (+)	702	WP_000594588.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AB3G49_RS08085 (AB3G49_08085)	gspK	1697487..1698446 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
AB3G49_RS08090 (AB3G49_08090)	-	1698676..1699272 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
AB3G49_RS08095 (AB3G49_08095)	ung	1699323..1700036 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
AB3G49_RS08100 (AB3G49_08100)	-	1700033..1701157 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AB3G49_RS08105 (AB3G49_08105)	tadA	1701164..1701667 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AB3G49_RS08110 (AB3G49_08110)	-	1701737..1702180 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.55 Da
• Isoelectric Point: 9.3468

>NTDB_id=1023197 AB3G49_RS08080 WP_000594588.1 1696786..1697487(+) (xcpW) [Acinetobacter baumannii strain SIMBA003]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1023197 AB3G49_RS08080 WP_000594588.1 1696786..1697487(+) (xcpW) [Acinetobacter baumannii strain SIMBA003]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATACCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991