Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB2M34_RS19570 Genome accession   NZ_CP161903
Coordinates   3633422..3634372 (-) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain DYJ24     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3628422..3639372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2M34_RS19550 (AB2M34_19550) - 3629593..3630525 (-) 933 WP_014478835.1 restriction endonuclease -
  AB2M34_RS19555 (AB2M34_19555) yclQ 3630755..3631708 (-) 954 WP_087614297.1 petrobactin ABC transporter substrate-binding protein YclQ -
  AB2M34_RS19560 (AB2M34_19560) yclP 3631730..3632488 (-) 759 WP_015252819.1 petrobactin ABC transporter ATP-binding protein YclP -
  AB2M34_RS19565 (AB2M34_19565) yclO 3632482..3633429 (-) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  AB2M34_RS19570 (AB2M34_19570) ceuB 3633422..3634372 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  AB2M34_RS19575 (AB2M34_19575) thrD 3634763..3636127 (+) 1365 WP_021481755.1 aspartate kinase -
  AB2M34_RS19580 (AB2M34_19580) yczN 3636280..3636393 (+) 114 WP_014478831.1 YjcZ family sporulation protein -
  AB2M34_RS19585 (AB2M34_19585) yczM 3636475..3636564 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  AB2M34_RS19590 (AB2M34_19590) phrC 3636663..3636785 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  AB2M34_RS19595 (AB2M34_19595) rapC 3636769..3637917 (-) 1149 WP_069837255.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=1023100 AB2M34_RS19570 WP_014475804.1 3633422..3634372(-) (ceuB) [Bacillus subtilis strain DYJ24]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1023100 AB2M34_RS19570 WP_014475804.1 3633422..3634372(-) (ceuB) [Bacillus subtilis strain DYJ24]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment