Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP/pknB   Type   Regulator
Locus tag   AB1395_RS07715 Genome accession   NZ_CP161815
Coordinates   1515406..1517289 (-) Length   627 a.a.
NCBI ID   WP_367783210.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SS-15     
Function   activate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1510406..1522289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1395_RS07690 (AB1395_07690) - 1511110..1511469 (-) 360 WP_104968357.1 S1 RNA-binding domain-containing protein -
  AB1395_RS07695 (AB1395_07695) - 1511469..1512869 (-) 1401 WP_218653585.1 Cof-type HAD-IIB family hydrolase -
  AB1395_RS07700 (AB1395_07700) - 1512917..1513555 (-) 639 WP_104968359.1 response regulator transcription factor -
  AB1395_RS07705 (AB1395_07705) - 1513548..1514546 (-) 999 WP_218653586.1 sensor histidine kinase -
  AB1395_RS07710 (AB1395_07710) liaF 1514543..1515241 (-) 699 WP_218653587.1 cell wall-active antibiotics response protein LiaF -
  AB1395_RS07715 (AB1395_07715) stkP/pknB 1515406..1517289 (-) 1884 WP_367783210.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  AB1395_RS07720 (AB1395_07720) - 1517289..1518026 (-) 738 WP_218654434.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  AB1395_RS07725 (AB1395_07725) rsmB 1518075..1519397 (-) 1323 WP_218653589.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  AB1395_RS07730 (AB1395_07730) fmt 1519387..1520328 (-) 942 WP_218653590.1 methionyl-tRNA formyltransferase -

Sequence

Protein


Download         Length: 627 a.a.        Molecular weight: 68212.39 Da        Isoelectric Point: 4.7291

>NTDB_id=1022604 AB1395_RS07715 WP_367783210.1 1515406..1517289(-) (stkP/pknB) [Streptococcus pluranimalium strain SS-15]
MIQIGKLFAGRYRILKSIGRGGMADVYLAHDLILDNEEVAIKVLRTNYQTDQIAVARFQREARAMAELNHPNIVAIRDIG
EEDGQQFLAMEYVNGPDLKKYIQDHAPLSNTETVRIMSEVLSAMQLAHQKGIVHRDLKPQNVLLTKDGVAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATIQSDIYAMGIMLFEMLTCHIPFDGDSAVTIALQHFQKPLPSIIFENRNVP
QALENVVIKATAKKLGDRYVSTTDMYQDLGTSLDSRCARESKLVFQDTTDTKTLPKIEPSPVKEAPKAAVAPDSVEVPKE
KEASKKEASTPPSSKKYKKPFWQRLFRFFILALVLLLAGFAFFFMSSSNDSATVPDVSGQTIQEAQATLEEAGLTVGAVS
RKESDSVEEGKVISTTPKSGTTQKEGSEVDLLVSKGSKRFVMTDYTGMSYRDAVSDLTENYGLSKNQIVKKEVTNNQYEP
GEIISQTPEAGEDFNPSGNDKIIFEVATASTVTIPTLVGYSYADAKNALLDLGFKASQIQTDSDQPSSSATVYAQYPYAG
TSVELSSGETVTLYLTTPEPSSTQPSSSSEEIDTDSSNQTSSSSSSSSSNHSTEATGDANSQPETTD

Nucleotide


Download         Length: 1884 bp        

>NTDB_id=1022604 AB1395_RS07715 WP_367783210.1 1515406..1517289(-) (stkP/pknB) [Streptococcus pluranimalium strain SS-15]
ATGATCCAAATCGGCAAATTATTTGCTGGGCGTTATCGTATTTTAAAATCTATCGGTCGCGGTGGTATGGCTGATGTTTA
TTTGGCACATGATTTGATTTTGGATAATGAAGAAGTAGCGATTAAGGTGCTTCGAACTAATTATCAAACAGATCAAATTG
CAGTTGCACGTTTCCAGAGAGAAGCGCGTGCTATGGCTGAATTAAATCACCCTAACATTGTAGCTATCAGAGATATTGGC
GAAGAAGATGGACAACAATTTCTTGCCATGGAATACGTTAATGGTCCAGATTTAAAGAAGTATATTCAAGATCATGCACC
TCTTTCTAATACTGAGACAGTTCGTATCATGAGTGAGGTGTTATCAGCTATGCAGCTGGCTCATCAAAAAGGAATTGTTC
ATCGTGACTTGAAGCCACAGAATGTTCTTTTGACAAAAGACGGAGTAGCTAAGGTAACTGATTTTGGGATTGCTGTAGCC
TTTGCAGAGACAAGTTTGACACAGACAAATTCGATGTTAGGAAGTGTTCATTACTTGTCACCAGAGCAAGCACGAGGCTC
TAAAGCAACGATACAAAGTGATATTTATGCTATGGGTATCATGTTGTTTGAAATGTTGACTTGTCATATCCCATTTGATG
GTGATAGTGCTGTTACGATTGCATTGCAACACTTTCAGAAACCTTTGCCATCGATTATTTTTGAAAATCGAAATGTTCCA
CAAGCTTTGGAGAATGTTGTTATCAAAGCAACTGCTAAAAAGCTCGGAGATCGCTATGTATCAACGACCGATATGTATCA
AGATTTAGGGACATCCCTAGATTCGCGCTGTGCTAGAGAATCAAAGTTAGTTTTTCAAGATACAACAGATACTAAGACAT
TACCTAAAATTGAGCCTTCACCTGTTAAAGAGGCACCTAAAGCAGCAGTTGCTCCGGATAGTGTCGAAGTGCCTAAAGAA
AAGGAAGCTTCTAAAAAAGAAGCCTCTACACCGCCGTCATCTAAAAAGTATAAGAAACCTTTTTGGCAACGTCTATTCAG
ATTTTTCATTTTGGCCCTCGTTTTATTACTAGCCGGTTTTGCATTTTTCTTTATGTCAAGTAGCAATGATAGTGCAACAG
TTCCTGATGTCTCAGGGCAAACAATCCAAGAAGCTCAAGCCACTCTAGAAGAGGCTGGTTTGACTGTAGGAGCTGTTTCT
CGTAAAGAAAGTGACAGTGTTGAGGAAGGAAAGGTCATTTCAACAACACCGAAATCAGGAACCACTCAAAAAGAGGGAAG
CGAAGTTGATCTACTAGTTTCAAAAGGTTCTAAACGCTTTGTTATGACAGATTATACCGGGATGTCATATAGGGATGCTG
TTAGTGATTTGACGGAAAATTATGGTTTGTCTAAAAATCAAATTGTCAAAAAAGAAGTTACAAATAATCAGTATGAACCG
GGAGAAATTATTAGTCAGACTCCAGAAGCTGGCGAAGATTTTAACCCTTCAGGTAATGATAAGATTATTTTTGAAGTAGC
AACAGCTTCAACAGTAACAATACCAACCTTAGTTGGTTACAGTTATGCAGATGCCAAGAATGCTTTATTAGACCTAGGAT
TTAAAGCTTCTCAGATTCAGACAGATTCAGATCAACCGTCGTCATCGGCAACGGTTTATGCACAATACCCATATGCAGGG
ACGTCTGTTGAACTCTCATCTGGAGAAACGGTAACATTGTATCTAACAACTCCTGAACCATCATCGACGCAACCGTCATC
ATCTTCTGAGGAGATAGATACGGATAGCAGTAATCAGACCTCTTCATCAAGTAGTTCTTCTAGTTCCAACCATTCAACGG
AAGCAACAGGTGATGCAAACAGCCAACCAGAAACTACTGACTAA

Domains

Predicted by InterproScan.

Protein kinase domain (Pkinase)

(12-227)

PASTA domain (PASTA)

(441-507)

PASTA domain (PASTA)

(512-576)

PASTA domain (PASTA)

(373-435)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP/pknB Streptococcus salivarius strain HSISS4

62.969

93.461

0.589
  pknB Streptococcus mutans UA159

60.847

94.099

0.573
  stkP Streptococcus pneumoniae TIGR4

53.299

94.258

0.502
  stkP Streptococcus pneumoniae D39

53.13

94.258

0.501
  stkP Streptococcus pneumoniae R6

53.13

94.258

0.501
  stkP Streptococcus pneumoniae Rx1

52.961

94.258

0.499

Multiple sequence alignment