Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AB1395_RS03995 Genome accession   NZ_CP161815
Coordinates   769128..770876 (+) Length   582 a.a.
NCBI ID   WP_367784044.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SS-15     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 764128..775876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1395_RS03975 (AB1395_03975) - 765180..765983 (+) 804 WP_367784038.1 hypothetical protein -
  AB1395_RS03980 (AB1395_03980) - 766006..766305 (+) 300 WP_018380975.1 DUF4176 domain-containing protein -
  AB1395_RS03985 (AB1395_03985) - 766894..767343 (+) 450 WP_367784040.1 MarR family winged helix-turn-helix transcriptional regulator -
  AB1395_RS03990 (AB1395_03990) rcrP 767336..769138 (+) 1803 WP_367784042.1 ABC transporter ATP-binding protein Regulator
  AB1395_RS03995 (AB1395_03995) rcrQ 769128..770876 (+) 1749 WP_367784044.1 ABC transporter ATP-binding protein Regulator
  AB1395_RS04000 (AB1395_04000) - 771120..771839 (+) 720 WP_367784046.1 GDSL-type esterase/lipase family protein -
  AB1395_RS04005 (AB1395_04005) - 771955..773334 (+) 1380 WP_367784047.1 metallophosphoesterase -
  AB1395_RS04010 (AB1395_04010) - 773321..773896 (+) 576 WP_367784215.1 uracil-DNA glycosylase family protein -
  AB1395_RS04015 (AB1395_04015) rpsU 773995..774171 (+) 177 WP_002884573.1 30S ribosomal protein S21 -
  AB1395_RS04020 (AB1395_04020) - 774395..775570 (+) 1176 WP_367784050.1 CapA family protein -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64747.99 Da        Isoelectric Point: 5.6193

>NTDB_id=1022586 AB1395_RS03995 WP_367784044.1 769128..770876(+) (rcrQ) [Streptococcus pluranimalium strain SS-15]
MKTKKKSLLSQSLPFLKGFRFVFVLAIMFTICSSIITVIGPDKLKEITDIITEGIVATVDMAKIKDIGFQLALLYGGGAL
LSYSASFIISTMIQHFSQRMRIAIAEKINRVPLSYFDAHSQGDTLSRVTNDVDNMTQALNQSLTTLVSSSVLLVGSIIMM
FKTNGIMAGTAIGSVLLGFLLSMVIMMKSQPFFKRQQDNLAAINGYVEETYTGHNLVISYNAREQAKTRFEELNQNLYSS
MWQSQFFSGIMMPMMQFIGNFGYVMVCLVGAKLVIDGDITMGTIVAFMTYVRIFSQPLGQMAQGATQMQTVSATMGRIFE
FLDAPEMEDESSKNQQLLDIKGHVDFDHVTFGYTPEKTIIKDFSAQAKPGQKVAIVGPTGAGKTTIVNLLMRFYEINSGS
ISIDQVNVHDMTREEVHNAFSMVLQDTWLFEGTIKENLIYNQTHITDEQVVEAAKAVGIHHFIMTLPKNYDSVLDDTLTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HETLMTENGFYADLYNSQFEVA

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=1022586 AB1395_RS03995 WP_367784044.1 769128..770876(+) (rcrQ) [Streptococcus pluranimalium strain SS-15]
GTGAAAACTAAGAAAAAATCATTACTCAGCCAGTCTCTTCCTTTCTTGAAAGGCTTCCGGTTTGTTTTTGTACTGGCAAT
TATGTTTACCATCTGTTCAAGTATCATTACGGTTATTGGACCGGATAAGCTAAAAGAAATCACCGACATTATTACAGAAG
GTATTGTTGCCACGGTTGACATGGCTAAAATCAAGGACATTGGTTTCCAATTAGCCCTCCTTTATGGTGGCGGTGCCCTT
TTGTCTTACTCGGCTAGCTTTATCATTTCAACTATGATTCAGCATTTTTCACAACGCATGCGCATAGCCATTGCTGAAAA
AATTAATCGTGTGCCTTTGTCATACTTTGACGCTCATTCACAGGGAGATACCCTATCACGTGTGACCAATGATGTGGATA
ATATGACCCAGGCTTTAAACCAGAGTTTGACTACTCTCGTTTCATCTAGTGTTCTCTTAGTTGGTTCCATTATCATGATG
TTTAAAACCAATGGCATCATGGCTGGGACAGCGATTGGATCAGTTCTCTTAGGTTTCTTGCTAAGTATGGTCATTATGAT
GAAAAGCCAACCATTCTTTAAGCGTCAGCAGGATAATTTAGCGGCGATTAATGGTTACGTTGAGGAAACGTATACAGGGC
ATAATCTGGTTATTTCTTACAATGCGAGAGAACAAGCCAAAACAAGATTCGAAGAGCTCAATCAAAATCTTTACAGCAGT
ATGTGGCAGTCCCAATTTTTCTCAGGGATTATGATGCCCATGATGCAGTTTATTGGTAATTTTGGCTATGTTATGGTCTG
CTTGGTTGGAGCTAAACTGGTCATTGATGGTGACATTACGATGGGAACTATTGTCGCTTTTATGACTTATGTTCGTATCT
TCTCTCAACCTCTTGGGCAAATGGCTCAGGGGGCTACACAAATGCAAACTGTTTCCGCAACGATGGGAAGAATTTTTGAA
TTCCTCGATGCGCCTGAAATGGAAGACGAAAGTTCTAAAAATCAGCAATTATTAGACATTAAAGGTCATGTTGATTTTGA
CCATGTGACTTTTGGATATACACCTGAAAAAACGATTATTAAGGATTTTTCAGCTCAAGCCAAACCTGGTCAAAAAGTGG
CCATTGTTGGTCCGACAGGGGCTGGTAAAACAACCATTGTCAATCTCCTCATGCGTTTTTATGAGATCAACAGTGGTAGC
ATTAGTATCGATCAAGTCAATGTGCACGATATGACGCGAGAAGAAGTCCATAATGCCTTCTCAATGGTCCTACAAGATAC
TTGGCTTTTTGAAGGAACTATCAAAGAAAACTTGATTTATAATCAGACTCATATCACAGATGAGCAAGTAGTTGAAGCGG
CCAAGGCTGTTGGGATCCATCACTTTATCATGACCCTTCCTAAAAATTACGATAGTGTCTTGGATGATACCTTAACCTTA
TCAGTTGGTCAGAAACAGCTCTTGACCATTGCACGTGCTCTTTTGAAAGATGCACCGCTCTTGATTTTGGATGAAGCTAC
CTCATCTGTCGATACACGTACGGAAGAGTTGATTCAAAAAGCCATGGACAAACTTATGGAAGGCAGAACATCCTTTGTCA
TCGCTCACCGTTTGTCAACCATCCGAAATGCTGATTTGATTTTGGTCATGAAAGATGGTAACATCATCGAGCAGGGTAAT
CATGAAACCTTGATGACTGAAAATGGTTTCTATGCGGATCTTTATAATTCGCAATTTGAAGTGGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.801

100

0.741

Multiple sequence alignment