Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   AB1395_RS03990 Genome accession   NZ_CP161815
Coordinates   767336..769138 (+) Length   600 a.a.
NCBI ID   WP_367784042.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SS-15     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 762336..774138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1395_RS03960 (AB1395_03960) - 762716..763393 (+) 678 WP_367784034.1 DUF443 family protein -
  AB1395_RS03965 (AB1395_03965) - 763390..763680 (+) 291 WP_172066835.1 DUF4176 domain-containing protein -
  AB1395_RS03970 (AB1395_03970) - 763897..765180 (+) 1284 WP_367784036.1 hypothetical protein -
  AB1395_RS03975 (AB1395_03975) - 765180..765983 (+) 804 WP_367784038.1 hypothetical protein -
  AB1395_RS03980 (AB1395_03980) - 766006..766305 (+) 300 WP_018380975.1 DUF4176 domain-containing protein -
  AB1395_RS03985 (AB1395_03985) - 766894..767343 (+) 450 WP_367784040.1 MarR family winged helix-turn-helix transcriptional regulator -
  AB1395_RS03990 (AB1395_03990) rcrP 767336..769138 (+) 1803 WP_367784042.1 ABC transporter ATP-binding protein Regulator
  AB1395_RS03995 (AB1395_03995) rcrQ 769128..770876 (+) 1749 WP_367784044.1 ABC transporter ATP-binding protein Regulator
  AB1395_RS04000 (AB1395_04000) - 771120..771839 (+) 720 WP_367784046.1 GDSL-type esterase/lipase family protein -
  AB1395_RS04005 (AB1395_04005) - 771955..773334 (+) 1380 WP_367784047.1 metallophosphoesterase -
  AB1395_RS04010 (AB1395_04010) - 773321..773896 (+) 576 WP_367784215.1 uracil-DNA glycosylase family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66778.50 Da        Isoelectric Point: 5.6929

>NTDB_id=1022585 AB1395_RS03990 WP_367784042.1 767336..769138(+) (rcrP) [Streptococcus pluranimalium strain SS-15]
MFKLLKYLNGKEWAMIALSTVFICLAVWMDIETPAYMSDITKLLQEKGTTTADIMEPGWKMLGLSLGSFIMAVCVGFLAA
RTAASFTTRLRSEIFNQVMDYSDAEIKQFSVPSLLTRTTNDLTQLQILITMGMQVVTRGPIMAIWALTKIWGKSSEWTWS
VAIAVAVVMLLLATLLIFAFPRLQKVQKYTDGLNATMREILSGIRVVRAYNAEDYQDAKFSEQNLALTRLNLFVSRLFAL
MNPVMTVVSSGLTLAIYWIGAQMIDNIAIKMTSRAAAMTSVQDRITVFSDMVVFSSYAMQVVMGFMMMVAIFIILPRALV
SAGRINEVLSLEPSIIFKKTSTEKLAEKGQVEYRNVTFKYAQESEAVVENISFKASAGQTIAFIGSTGSGKTSLVKLLPR
FYDVTSGQILVDGIDIKDYSHEELNNKVGYIPQKAVLFSGTIRSNMTFGESGQKQPDDQDIWDALELAQAKDFVQAKEDG
LETEVAQGGTNFSGGQRQRLAIARALARKPEMLIFDDSFSALDYKTDRILRQALNEKTGQMTKLIVAQRISTIMDADQIL
VLDQGQVVGQGTHKELLANNSVYQEIAYSQLSKEELEREN

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1022585 AB1395_RS03990 WP_367784042.1 767336..769138(+) (rcrP) [Streptococcus pluranimalium strain SS-15]
ATGTTTAAATTATTGAAATATTTAAATGGTAAAGAGTGGGCGATGATTGCCCTATCTACCGTTTTTATTTGTTTAGCTGT
CTGGATGGATATTGAAACACCAGCCTACATGTCAGATATTACCAAGTTACTTCAGGAAAAAGGAACAACGACAGCTGATA
TTATGGAACCGGGTTGGAAAATGCTCGGACTATCTTTGGGCAGTTTTATCATGGCAGTTTGTGTCGGTTTTTTAGCAGCT
CGAACAGCAGCTAGTTTTACGACACGTTTACGTTCCGAAATTTTCAATCAGGTTATGGATTATTCCGATGCTGAGATCAA
ACAATTCTCCGTACCAAGCCTCTTAACCAGAACAACCAATGACCTAACGCAGTTACAAATTTTAATTACCATGGGTATGC
AGGTAGTAACGCGTGGTCCTATTATGGCAATCTGGGCCTTGACCAAGATTTGGGGTAAAAGTAGTGAGTGGACCTGGTCC
GTTGCTATTGCGGTTGCAGTAGTCATGCTCTTGTTAGCAACTCTTTTGATTTTTGCTTTTCCGCGTTTACAAAAGGTCCA
AAAATACACTGATGGTCTTAATGCAACCATGCGTGAAATTTTATCAGGGATTCGCGTTGTTCGAGCCTATAATGCTGAAG
ACTATCAAGATGCAAAATTTTCAGAGCAAAACCTAGCTCTGACTCGTTTGAATCTTTTTGTCAGTCGCCTATTTGCCTTG
ATGAATCCAGTCATGACAGTAGTTTCCAGTGGTTTGACCTTGGCTATTTATTGGATTGGGGCTCAGATGATTGATAATAT
CGCTATCAAGATGACGTCAAGGGCAGCTGCTATGACAAGTGTTCAAGATCGTATTACTGTTTTTAGTGATATGGTTGTTT
TTTCATCCTACGCTATGCAAGTTGTCATGGGCTTTATGATGATGGTCGCTATCTTTATTATCCTACCGCGTGCCCTGGTG
TCAGCAGGGCGGATTAATGAAGTGCTTTCTTTGGAACCAAGCATTATCTTCAAGAAAACATCAACTGAGAAATTAGCTGA
AAAAGGCCAAGTAGAATACCGAAATGTTACCTTCAAATATGCCCAAGAATCAGAAGCAGTTGTCGAAAATATCTCCTTCA
AAGCTAGCGCAGGTCAAACGATTGCCTTTATCGGGTCAACTGGTTCTGGTAAAACAAGTTTGGTTAAACTTTTACCACGT
TTTTATGATGTGACGTCAGGTCAGATTTTAGTTGATGGTATTGATATTAAGGATTATAGTCATGAGGAACTCAATAATAA
AGTTGGTTATATCCCTCAGAAAGCTGTACTCTTTAGTGGAACTATTCGTTCTAACATGACCTTTGGTGAGAGCGGTCAAA
AACAACCAGATGATCAAGATATTTGGGATGCGCTAGAATTGGCTCAAGCTAAAGACTTTGTCCAAGCTAAAGAAGACGGA
CTTGAAACGGAAGTGGCACAAGGTGGAACAAACTTCTCTGGTGGTCAACGCCAACGATTGGCGATTGCGCGTGCCCTTGC
TCGTAAACCGGAAATGTTGATTTTTGATGATTCTTTCTCAGCCCTTGATTATAAGACGGATCGTATTTTGCGTCAGGCCT
TAAATGAAAAAACGGGACAGATGACCAAACTCATTGTTGCTCAAAGGATTTCAACCATTATGGATGCGGACCAAATCTTA
GTATTGGATCAAGGTCAGGTTGTTGGTCAAGGCACTCATAAGGAACTTTTGGCAAACAACAGCGTTTACCAAGAAATTGC
CTATTCACAATTATCTAAGGAGGAATTGGAACGTGAAAACTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-267)

ABC transporter (ABC_tran)

(369-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

73.702

99.5

0.733

Multiple sequence alignment