Detailed information NTG1022584

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: AB1395_RS03690
• Genome accession: NZ_CP161815
• Coordinates: 715220..716449 (+)
• Length: 409 a.a.
• NCBI ID: WP_218654239.1
• Uniprot ID: -
• Organism: Streptococcus pluranimalium strain SS-15
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 710220..721449

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1395_RS03670 (AB1395_03670)	-	710964..712244 (-)	1281	WP_367783941.1	hydroxymethylglutaryl-CoA reductase, degradative	-
AB1395_RS03675 (AB1395_03675)	-	712237..713412 (-)	1176	WP_367784211.1	hydroxymethylglutaryl-CoA synthase	-
AB1395_RS03680 (AB1395_03680)	-	713617..714456 (+)	840	WP_367783943.1	thymidylate synthase	-
AB1395_RS03685 (AB1395_03685)	-	714526..715029 (+)	504	WP_278025164.1	dihydrofolate reductase	-
AB1395_RS03690 (AB1395_03690)	clpX	715220..716449 (+)	1230	WP_218654239.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
AB1395_RS03695 (AB1395_03695)	yihA	716461..717060 (+)	600	WP_104967640.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
AB1395_RS03700 (AB1395_03700)	-	717068..717715 (+)	648	WP_278025165.1	deoxynucleoside kinase	-
AB1395_RS03705 (AB1395_03705)	rplJ	717968..718471 (+)	504	WP_104968827.1	50S ribosomal protein L10	-
AB1395_RS03710 (AB1395_03710)	rplL	718546..718914 (+)	369	WP_018379545.1	50S ribosomal protein L7/L12	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45129.65 Da
• Isoelectric Point: 4.4527

>NTDB_id=1022584 AB1395_RS03690 WP_218654239.1 715220..716449(+) (clpX) [Streptococcus pluranimalium strain SS-15]
MVGNRTNDTMVYCSFCGKNQDEVKKIIAGNGVFICDECVALSQEIIKEELAEEVLADLTDVPKPKELLDILNQYVVGQDR
AKRALAVAVYNHYKRISFTESRDEEDVVLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPSQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKKVSDDSSYMQEIIAEDIQKFGLIPEFIGRLPVTAALEQLTVDDLIMI
LTEPKNALVRQYETLLSYDNVELDFDRAALESIAAKAIERKTGARGLRSIIEETMMDIMFEVPSQENVKRVRITKEAVDG
TGQPILETA

Nucleotide

• Length: 1230 bp

>NTDB_id=1022584 AB1395_RS03690 WP_218654239.1 715220..716449(+) (clpX) [Streptococcus pluranimalium strain SS-15]
ATGGTTGGAAATCGAACAAATGATACAATGGTTTATTGCTCTTTCTGTGGCAAGAACCAAGATGAGGTTAAAAAAATTAT
TGCAGGTAATGGAGTGTTTATCTGTGATGAATGTGTAGCTTTATCACAAGAAATTATTAAAGAAGAGTTGGCTGAAGAAG
TTTTAGCTGATTTGACAGATGTCCCAAAACCAAAAGAGTTATTGGATATTTTAAACCAATATGTAGTTGGTCAAGATCGC
GCCAAACGTGCTTTAGCCGTTGCTGTTTATAATCATTATAAGCGTATTAGTTTTACAGAAAGTCGTGACGAAGAAGATGT
TGTTCTTCAAAAATCAAATATTTTGATGATTGGACCAACAGGTTCAGGAAAAACCTTCCTCGCCCAAACTTTGGCTAAAA
GTCTCAATGTGCCCTTTGCTATTGCGGATGCGACATCATTGACTGAAGCAGGCTATGTGGGAGAAGACGTTGAGAATATC
CTTTTAAAACTCATTCAAGCAGCAGATTATAATGTTGAGCGTGCCGAACGTGGCATTATCTATGTCGATGAAATCGATAA
AATTGCTAAAAAAGGGGAAAATGTATCTATCACGCGTGACGTTTCCGGTGAAGGGGTACAACAGGCGCTTCTTAAAATTA
TTGAAGGGACAGTTGCTAGTGTACCACCACAAGGTGGGCGTAAACATCCTAGTCAAGAGATGATTCAAATTGACACTAAG
AATATCCTGTTTATTGTTGGTGGTGCTTTTGATGGAATCGAGGAAATCGTTAAACAACGTCTTGGGGAAAAAATCATTGG
CTTTGGTCAAAATAATAAGAAAGTTTCAGATGACTCTTCATACATGCAAGAAATCATTGCTGAAGATATTCAAAAATTTG
GACTTATCCCGGAATTTATCGGTCGCTTGCCTGTGACAGCAGCACTTGAGCAGCTGACTGTTGATGATTTAATCATGATT
TTGACAGAGCCTAAGAATGCTCTTGTTCGACAATATGAAACGCTTCTTTCTTATGATAATGTAGAGTTAGACTTTGATAG
AGCCGCTTTAGAATCGATTGCGGCAAAGGCTATTGAACGTAAAACAGGTGCGCGTGGTTTACGTTCAATTATCGAAGAAA
CGATGATGGATATTATGTTTGAAGTACCAAGTCAAGAAAATGTTAAGCGTGTTCGTATCACCAAAGAAGCAGTAGATGGT
ACTGGCCAGCCAATTTTAGAAACGGCTTAG

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.753	100	0.888
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.86	98.044	0.548