Detailed information NTG1022575

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DQN61_RS08915
• Genome accession: NZ_LS483391
• Coordinates: 1689804..1691072 (+)
• Length: 422 a.a.
• NCBI ID: WP_011018264.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC8320
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1684804..1696072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN61_RS08900 (NCTC8320_01774)	-	1685257..1687230 (+)	1974	WP_011018261.1	amidase family protein	-
DQN61_RS08905 (NCTC8320_01775)	pabB	1687415..1689172 (+)	1758	WP_011018262.1	aminodeoxychorismate synthase component I	-
DQN61_RS08910 (NCTC8320_01776)	-	1689205..1689771 (+)	567	WP_011018263.1	aminodeoxychorismate/anthranilate synthase component II	-
DQN61_RS08915 (NCTC8320_01777)	rarA	1689804..1691072 (+)	1269	WP_011018264.1	replication-associated recombination protein A	Machinery gene
DQN61_RS08930 (NCTC8320_01780)	-	1691571..1692011 (+)	441	WP_011018265.1	GNAT family N-acetyltransferase	-
DQN61_RS08935 (NCTC8320_01781)	-	1692066..1692572 (+)	507	WP_011018266.1	DNA topology modulation protein	-
DQN61_RS08940 (NCTC8320_01782)	smeZ	1692821..1693522 (+)	702	WP_011018268.1	streptococcal mitogenic exotoxin SmeZ	-
DQN61_RS10060 (NCTC8320_01783)	-	1693938..1694072 (-)	135	WP_011018269.1	hypothetical protein	-
DQN61_RS08950 (NCTC8320_01784)	-	1694251..1695879 (+)	1629	WP_011018270.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46671.15 Da
• Isoelectric Point: 6.3774

>NTDB_id=1022575 DQN61_RS08915 WP_011018264.1 1689804..1691072(+) (rarA) [Streptococcus pyogenes strain NCTC8320]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=1022575 DQN61_RS08915 WP_011018264.1 1689804..1691072(+) (rarA) [Streptococcus pyogenes strain NCTC8320]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGTAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCTCCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGTAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.569	99.052	0.59