Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DQM64_RS05990 Genome accession   NZ_LS483387
Coordinates   1136432..1136914 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain NCTC8187     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1131432..1141914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM64_RS05970 (NCTC8187_01190) alsS 1131691..1133373 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  DQM64_RS05975 (NCTC8187_01191) - 1133483..1134709 (-) 1227 WP_000934873.1 hypothetical protein -
  DQM64_RS05980 (NCTC8187_01192) - 1134699..1135889 (-) 1191 WP_001081537.1 AI-2E family transporter -
  DQM64_RS05985 (NCTC8187_01193) - 1135981..1136442 (-) 462 WP_000796050.1 NUDIX hydrolase -
  DQM64_RS05990 (NCTC8187_01194) mutX 1136432..1136914 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  DQM64_RS05995 (NCTC8187_01195) hylB 1137133..1140378 (+) 3246 WP_000403395.1 hyaluronate lyase -
  DQM64_RS06000 (NCTC8187_01196) rfbB 1140430..1141476 (-) 1047 WP_000134281.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=1022239 DQM64_RS05990 WP_000163512.1 1136432..1136914(-) (mutX) [Streptococcus agalactiae strain NCTC8187]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1022239 DQM64_RS05990 WP_000163512.1 1136432..1136914(-) (mutX) [Streptococcus agalactiae strain NCTC8187]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712

Multiple sequence alignment