Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ABTQ20_RS08060 Genome accession   NZ_CP160858
Coordinates   1712625..1713902 (-) Length   425 a.a.
NCBI ID   WP_003640733.1    Uniprot ID   A0A0G9FEC4
Organism   Lactiplantibacillus plantarum strain AUSA002     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1707625..1718902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABTQ20_RS08055 (ABTQ20_08055) - 1710876..1712585 (-) 1710 WP_003640732.1 proline--tRNA ligase -
  ABTQ20_RS08060 (ABTQ20_08060) eeP 1712625..1713902 (-) 1278 WP_003640733.1 RIP metalloprotease RseP Regulator
  ABTQ20_RS08065 (ABTQ20_08065) - 1713940..1714725 (-) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  ABTQ20_RS08070 (ABTQ20_08070) - 1714741..1715520 (-) 780 WP_003640735.1 isoprenyl transferase -
  ABTQ20_RS08075 (ABTQ20_08075) frr 1715640..1716203 (-) 564 WP_003640736.1 ribosome recycling factor -
  ABTQ20_RS08080 (ABTQ20_08080) pyrH 1716205..1716927 (-) 723 WP_003640737.1 UMP kinase -
  ABTQ20_RS08085 (ABTQ20_08085) tsf 1717127..1718005 (-) 879 WP_063487838.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45841.33 Da        Isoelectric Point: 9.5616

>NTDB_id=1022205 ABTQ20_RS08060 WP_003640733.1 1712625..1713902(-) (eeP) [Lactiplantibacillus plantarum strain AUSA002]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1022205 ABTQ20_RS08060 WP_003640733.1 1712625..1713902(-) (eeP) [Lactiplantibacillus plantarum strain AUSA002]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGGGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGTATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGCCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAAATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAACGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATATATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(210-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0G9FEC4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.832

100

0.492

  eeP Streptococcus thermophilus LMD-9

48.832

100

0.492


Multiple sequence alignment