Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ABZM97_RS00575 | Genome accession | NZ_CP160797 |
| Coordinates | 103644..106076 (+) | Length | 810 a.a. |
| NCBI ID | WP_087991672.1 | Uniprot ID | - |
| Organism | Bacillus vallismortis strain BL-01 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98644..111076
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABZM97_RS00560 (ABZM97_00560) | ctsR | 101521..101985 (+) | 465 | WP_087991669.1 | transcriptional regulator CtsR | - |
| ABZM97_RS00565 (ABZM97_00565) | mcsA | 101999..102556 (+) | 558 | WP_087991670.1 | protein-arginine kinase activator protein McsA | - |
| ABZM97_RS00570 (ABZM97_00570) | - | 102556..103647 (+) | 1092 | WP_087991671.1 | protein arginine kinase | - |
| ABZM97_RS00575 (ABZM97_00575) | clpC | 103644..106076 (+) | 2433 | WP_087991672.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ABZM97_RS00580 (ABZM97_00580) | radA | 106168..107544 (+) | 1377 | WP_087991673.1 | DNA repair protein RadA | Machinery gene |
| ABZM97_RS00585 (ABZM97_00585) | disA | 107548..108630 (+) | 1083 | WP_087991674.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ABZM97_RS00590 (ABZM97_00590) | - | 108747..109847 (+) | 1101 | WP_087991675.1 | PIN/TRAM domain-containing protein | - |
| ABZM97_RS00595 (ABZM97_00595) | ispD | 109862..110560 (+) | 699 | WP_253268768.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ABZM97_RS00600 (ABZM97_00600) | ispF | 110553..111029 (+) | 477 | WP_087991677.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90029.51 Da Isoelectric Point: 6.0253
>NTDB_id=1021994 ABZM97_RS00575 WP_087991672.1 103644..106076(+) (clpC) [Bacillus vallismortis strain BL-01]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
IVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
IVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=1021994 ABZM97_RS00575 WP_087991672.1 103644..106076(+) (clpC) [Bacillus vallismortis strain BL-01]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGGATTGCCGCTAAAGCTCTACAAGCGCTTG
GACTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC
ACTCCAAGAGCTAAAAAGGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTAGGTCATTCTTATGTTGGAACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGTGAAGGTGTTGCTGCAAGAGTTCTGAATAACCTCGGCGTCAGCTTAAATAAAG
CTAGACAGCAAGTGCTCCAGCTTCTCGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGATAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTAGACCCTGTAATCGGCAGAAGCAA
GGAAATTCAGCGTGTAATCGAAGTGTTAAGCCGAAGAACGAAAAACAACCCTGTTCTCATTGGTGAGCCAGGTGTAGGTA
AAACTGCAATCGCAGAAGGTTTGGCACAGCAAATTATTAATAACGAAGTTCCCGAGATCTTACGCGATAAACGCGTGATG
ACATTAGACATGGGAACAGTTGTTGCCGGCACTAAATACCGCGGTGAATTTGAGGATCGCCTGAAAAAAGTCATGGATGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTCCATACCTTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCTAATATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCATTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCATCTGCAGATGAAAG
CATTCAAATTTTACAAGGCTTGCGTGACAGATACGAAGCCCACCACCGTGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTGATTGATGAAGCGGGTTCA
AAGGTTAGACTGCGCTCTTTTACCACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCGGTGCAGAGCCAAGAGTTTGAAAAAGCGGCCTCCTTGCGCGACACTGAGCAGCGCTTGCGCGAGCAAGTAG
AGGATACAAAAAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA
TCTAGCTGGACTGGTGTGCCAGTATCTAAAATCGCTCAAACCGAAACAGATAAGCTTCTCAATATGGAGAGCATTCTTCA
CTCCCGTGTCATCGGCCAGGATGAAGCGGTTGTCGCTGTTGCAAAAGCAGTCAGACGCGCAAGAGCAGGGTTAAAAGATC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTGGGTAAAACAGAGCTGGCGCGAGCACTTGCTGAA
TCCATTTTCGGCGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGTCAATTAACAGAGAAAGTAAGAAGAAAACCGTACTCTGTGG
TGCTTCTTGATGAGATTGAGAAAGCACACCCAGATGTCTTCAATATTTTATTGCAAGTTCTTGAAGACGGGCGTTTGACT
GACTCTAAAGGACGTACAGTCGATTTCCGCAATACGATTCTGATTATGACATCAAACGTCGGAGCAAGTGAACTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAACTGA
AACGCGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACACCTTACT
GAAATCGTGTCATTAATGTCTGACCAATTAACGAAACGTCTGAAAGAACAGGATCTTTCTATCGAATTGACAGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGTGTTGATCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTAG
AAGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATCGTTCTCGATGTAGAAGACGGCGAA
ATTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGGATTGCCGCTAAAGCTCTACAAGCGCTTG
GACTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC
ACTCCAAGAGCTAAAAAGGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTAGGTCATTCTTATGTTGGAACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGTGAAGGTGTTGCTGCAAGAGTTCTGAATAACCTCGGCGTCAGCTTAAATAAAG
CTAGACAGCAAGTGCTCCAGCTTCTCGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGATAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTAGACCCTGTAATCGGCAGAAGCAA
GGAAATTCAGCGTGTAATCGAAGTGTTAAGCCGAAGAACGAAAAACAACCCTGTTCTCATTGGTGAGCCAGGTGTAGGTA
AAACTGCAATCGCAGAAGGTTTGGCACAGCAAATTATTAATAACGAAGTTCCCGAGATCTTACGCGATAAACGCGTGATG
ACATTAGACATGGGAACAGTTGTTGCCGGCACTAAATACCGCGGTGAATTTGAGGATCGCCTGAAAAAAGTCATGGATGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTCCATACCTTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCTAATATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCATTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCATCTGCAGATGAAAG
CATTCAAATTTTACAAGGCTTGCGTGACAGATACGAAGCCCACCACCGTGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTGATTGATGAAGCGGGTTCA
AAGGTTAGACTGCGCTCTTTTACCACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCGGTGCAGAGCCAAGAGTTTGAAAAAGCGGCCTCCTTGCGCGACACTGAGCAGCGCTTGCGCGAGCAAGTAG
AGGATACAAAAAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA
TCTAGCTGGACTGGTGTGCCAGTATCTAAAATCGCTCAAACCGAAACAGATAAGCTTCTCAATATGGAGAGCATTCTTCA
CTCCCGTGTCATCGGCCAGGATGAAGCGGTTGTCGCTGTTGCAAAAGCAGTCAGACGCGCAAGAGCAGGGTTAAAAGATC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTGGGTAAAACAGAGCTGGCGCGAGCACTTGCTGAA
TCCATTTTCGGCGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGTCAATTAACAGAGAAAGTAAGAAGAAAACCGTACTCTGTGG
TGCTTCTTGATGAGATTGAGAAAGCACACCCAGATGTCTTCAATATTTTATTGCAAGTTCTTGAAGACGGGCGTTTGACT
GACTCTAAAGGACGTACAGTCGATTTCCGCAATACGATTCTGATTATGACATCAAACGTCGGAGCAAGTGAACTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAACTGA
AACGCGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACACCTTACT
GAAATCGTGTCATTAATGTCTGACCAATTAACGAAACGTCTGAAAGAACAGGATCTTTCTATCGAATTGACAGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGTGTTGATCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTAG
AAGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATCGTTCTCGATGTAGAAGACGGCGAA
ATTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.259 |
100 |
0.993 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.062 |
100 |
0.501 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.359 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus mutans UA159 |
43.584 |
100 |
0.444 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.664 |
87.778 |
0.427 |
| clpE | Streptococcus mutans UA159 |
53.159 |
80.123 |
0.426 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.234 |
80.123 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.234 |
80.123 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.234 |
80.123 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.234 |
80.123 |
0.419 |