Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ABVG09_RS05405 Genome accession   NZ_CP160447
Coordinates   1106406..1107674 (+) Length   422 a.a.
NCBI ID   WP_002338823.1    Uniprot ID   A0A4Y3JME5
Organism   Enterococcus lactis strain SF68     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1101406..1112674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVG09_RS05380 (ABVG09_05380) tsf 1102142..1103023 (+) 882 WP_002293878.1 translation elongation factor Ts -
  ABVG09_RS05385 (ABVG09_05385) pyrH 1103159..1103881 (+) 723 WP_002293877.1 UMP kinase -
  ABVG09_RS05390 (ABVG09_05390) frr 1103884..1104441 (+) 558 WP_002293875.1 ribosome recycling factor -
  ABVG09_RS05395 (ABVG09_05395) - 1104636..1105448 (+) 813 WP_073441516.1 isoprenyl transferase -
  ABVG09_RS05400 (ABVG09_05400) - 1105445..1106245 (+) 801 WP_002308898.1 phosphatidate cytidylyltransferase -
  ABVG09_RS05405 (ABVG09_05405) eeP 1106406..1107674 (+) 1269 WP_002338823.1 RIP metalloprotease RseP Regulator
  ABVG09_RS05410 (ABVG09_05410) - 1107742..1109451 (+) 1710 WP_002314809.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46047.51 Da        Isoelectric Point: 4.8405

>NTDB_id=1021188 ABVG09_RS05405 WP_002338823.1 1106406..1107674(+) (eeP) [Enterococcus lactis strain SF68]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIETDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIIPNGAAAEAGLKENDKVVSVDGKEIHSWN
DLTTVITKNPGKTLDFEIEREGKMQSVDVTPKSVESNGEKVGQLGIQAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVIGLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1021188 ABVG09_RS05405 WP_002338823.1 1106406..1107674(+) (eeP) [Enterococcus lactis strain SF68]
ATGAAAACGATACTAACATTTATCATTGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGTATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGGGATGAAACAG
AAGTAGTGACCTATCCTGTCGATCACGATGCGACGATTATTGAAACCGACGGAACAGAAATCAGAATTGCACCAAAAGAT
GTACAGTTCCAATCGGCTAAACTGTGGCAGCGTATGCTGACCAATTTTGCCGGTCCGATGAATAACTTTATCTTGGCAAT
CGTGTTATTCATTATTCTTGCATTCATGCAAGGCGGTGTTCAAGTGACAAATACTAATCGTGTAGGAGAGATTATCCCTA
ATGGTGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATAAGGTAGTTAGTGTGGACGGTAAAGAAATCCACTCTTGGAAC
GATTTGACAACAGTCATCACGAAAAATCCAGGTAAAACATTAGATTTTGAGATCGAACGAGAAGGTAAGATGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGCATACAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATCGGCGGAACACGTCAAGCTTTTAGCGGTTCATTAGAAATTTTCAAAGCCTTAGGTTCACTGTTT
ACAGGTTTTAGTTTAGATAAATTAGGCGGGCCTGTTATGATGTACCAATTGTCTTCAGAAGCAGCAAACCAAGGTGTAAC
AACTGTTATTGGTTTGATGGCGCTTCTTTCAATGAACCTGGGAATCGTCAATCTGCTTCCAATCCCTGCCTTAGATGGTG
GGAAATTAGTGTTGAATATTTTTGAAGGGATTCGTGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.972

100

0.547
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545

Multiple sequence alignment