Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ABZP31_RS12000 Genome accession   NZ_CP160437
Coordinates   2558877..2563259 (-) Length   1460 a.a.
NCBI ID   WP_367156814.1    Uniprot ID   -
Organism   Acinetobacter sp. FL     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2553877..2568259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZP31_RS11970 (ABZP31_11970) elsL 2554883..2555392 (-) 510 WP_005404350.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  ABZP31_RS11975 (ABZP31_11975) - 2555396..2555803 (-) 408 WP_005404349.1 YbaN family protein -
  ABZP31_RS11980 (ABZP31_11980) - 2555909..2556778 (+) 870 WP_005027617.1 DUF1853 family protein -
  ABZP31_RS11985 (ABZP31_11985) - 2556916..2557056 (+) 141 WP_005018775.1 entericidin A/B family lipoprotein -
  ABZP31_RS11990 (ABZP31_11990) dapE 2557200..2558336 (+) 1137 WP_005027619.1 succinyl-diaminopimelate desuccinylase -
  ABZP31_RS11995 (ABZP31_11995) - 2558397..2558861 (-) 465 WP_005027621.1 hypothetical protein -
  ABZP31_RS12000 (ABZP31_12000) chpA 2558877..2563259 (-) 4383 WP_367156814.1 Hpt domain-containing protein Regulator
  ABZP31_RS12005 (ABZP31_12005) - 2563425..2565506 (-) 2082 WP_248134151.1 methyl-accepting chemotaxis protein -
  ABZP31_RS12010 (ABZP31_12010) - 2565552..2566088 (-) 537 WP_005406522.1 chemotaxis protein CheW -
  ABZP31_RS12015 (ABZP31_12015) - 2566093..2566461 (-) 369 WP_005018768.1 response regulator -
  ABZP31_RS12020 (ABZP31_12020) pilG 2566483..2566866 (-) 384 WP_005018759.1 twitching motility response regulator PilG Regulator
  ABZP31_RS12025 (ABZP31_12025) - 2567204..2567785 (+) 582 WP_248134202.1 hypothetical protein -

Sequence


Protein


Download         Length: 1460 a.a.        Molecular weight: 164819.70 Da        Isoelectric Point: 4.4302

>NTDB_id=1021134 ABZP31_RS12000 WP_367156814.1 2558877..2563259(-) (chpA) [Acinetobacter sp. FL]
MKQILKDLIGTTTLPEDSYLDQDAEILEIFVEELEEIFTDLDVLIQQWIQQPEQQDKLTSIRRYFHTLKGSGRMVGAKSS
GELAWTVEDLLNRIIAKTQAFTLAISRYVELVFKIYKYKLFYNFKNSQPHAIDLRPLVLIGQQLQQQGSLAPALEELLEL
SWTLCSPETVTGLELVEHTAETLPPLGVEKLEIHEEFDSLTAETLAIFLEESEEHLATIDEFLNNNEQGSNYNALIRALH
TLRGSSAMAQVEHIFEASSKIENLFKTMLQDELVSTSNETALLTHYAEFVRDYLYILKQECNIEQLERVYQTFNHAWENY
GFHQEPVDDLVNPQGLVSRLLELEINQLLDAEFEFDQRTRTEYPEYLQLLVKQAQELVEHTRNRASQGVYDFTLELLQSY
QQLLAKPQLLNLDYAYELYTQAHQQLIYLFDTLAAGQRVSLSPAHQSLLEELSAFVQQEIQQVEELSTVTEPFKAPVDVA
VLEHTFNLGELSARIAADKALMHSEHSNQVADADLRDIFLEEAEELLAGMDSDLNNWTKESGQVTALNNLMRYLHTLKGG
ANMVQATHMGLIAHELESIYQRIINGQVQVSTVLMSIIRLVQDELAERIQILREQQIDYPAPATIEILKNIESISTGVLV
TTAEPKVAEEKLSESSQNIESDIADCTLADAEIAEHSEELQTDEQVRSIVEEVFLEEAEELLQTAHKLLDQWVEERSNRS
LLLQLQRNAHSLKGGARMAELEPVAVIAYALENTFEQFGLHNLTTSVYDPLLHTALRWLENAIFKEQYENFDSLKHSLDS
IQFTEIPAQLINQIPADDIVADGSLFEFVHGDGTEPPSMMGEWDNTERTENNEMIRISADLVEKMIDLAGENSINRSRIE
MDVGQVGSILSDMELAIQRLADQLRRMEGELESQIIAKHGTENSRYSDFDPLEMDQYSSLNQLSKSLAESASDLLDFKTT
LSEKIRDTEGLLLQQSRIQAEIQENLMRTRLVPFSRLLPRLQRIARQTSSALNRPAELVVQNTEGELDRNILERLVTPLE
HMLRNAIDHGIETIEQRLKQGKPESGRIELNINRQGTDVIITFTDDGQGINLDKLKNKALERGLIGAEQKLEAEELAQLI
FHPGLSTAAEITQISGRGVGLDVVQSSIKAMGGHVTVESVQGQGTTFTIRVPTTVAISDALMVKAGDQQYAVPLAQIERI
VRISPSMLEDYFAGKEDTFRIDNMYYKLRYLSEFVANQSLPRLTGIAHSLPVLLIKGSSGQTVALLVDQLVGSRAQIVVK
PVGQQLASVGAVAGATILGDGQVCLILDGQYIARQVQSSLRVKEVKESRELHRFNDERRLIMIVDDSVTVRKVTSRLLER
QGYDVVTAKDGVEAIEQLESIKPDLMLLDIEMPRMDGFEVTNLVRHHDVHRNMPIIMITSRTGEKHRERAFALGATQYMG
KPFQEADLLANIEALLEVMV

Nucleotide


Download         Length: 4383 bp        

>NTDB_id=1021134 ABZP31_RS12000 WP_367156814.1 2558877..2563259(-) (chpA) [Acinetobacter sp. FL]
ATGAAACAAATACTAAAAGACCTGATTGGAACAACGACTCTTCCTGAAGATAGCTATCTTGACCAAGATGCAGAGATTCT
TGAAATTTTTGTTGAAGAACTAGAAGAAATCTTTACTGATTTGGATGTTTTGATCCAGCAGTGGATACAGCAGCCTGAGC
AGCAGGACAAGCTGACCAGTATTCGCCGTTATTTTCATACCTTAAAAGGCTCCGGCCGGATGGTAGGAGCTAAAAGTTCC
GGTGAGTTAGCTTGGACGGTTGAAGATCTCTTGAATCGAATAATTGCTAAAACACAGGCTTTTACCCTGGCGATCAGTCG
TTATGTAGAATTGGTCTTTAAGATTTACAAATACAAGTTATTTTATAACTTTAAAAATAGTCAGCCTCATGCGATTGATT
TGCGTCCCCTCGTATTGATCGGGCAACAACTGCAACAGCAGGGCAGTCTTGCACCGGCACTTGAGGAATTGCTGGAGCTT
AGCTGGACCTTATGTTCGCCTGAGACAGTCACCGGGCTTGAGCTGGTGGAACATACAGCAGAGACTCTACCACCACTAGG
TGTAGAGAAGCTTGAAATTCACGAGGAATTTGATTCATTAACTGCCGAGACACTGGCGATATTTCTTGAAGAGTCGGAAG
AACATCTGGCAACTATTGATGAGTTCTTGAATAATAATGAACAGGGCAGTAATTATAATGCTCTGATCCGCGCTTTACAT
ACTTTGCGTGGCAGCTCGGCCATGGCTCAGGTAGAACACATATTTGAAGCAAGTAGTAAAATTGAAAATCTGTTTAAAAC
CATGCTGCAAGATGAGCTGGTATCTACTTCAAATGAAACCGCTTTACTTACTCATTATGCTGAATTTGTAAGGGATTATC
TCTACATTCTAAAACAGGAATGTAATATAGAACAGTTGGAACGGGTTTATCAGACCTTTAATCATGCTTGGGAAAACTAC
GGATTTCATCAAGAACCTGTGGATGATCTCGTGAACCCTCAAGGTCTGGTTTCAAGGCTCCTCGAGCTTGAGATCAACCA
GTTACTAGATGCCGAGTTCGAGTTTGATCAGCGTACCCGTACCGAATATCCAGAATATTTACAGCTTTTGGTAAAGCAGG
CACAGGAACTGGTTGAACATACACGAAACCGTGCCTCTCAAGGCGTATATGATTTTACGTTAGAACTACTTCAGAGCTAT
CAGCAGCTCTTGGCAAAACCGCAGCTATTAAATCTTGATTATGCATATGAACTGTATACTCAAGCTCATCAGCAGCTGAT
TTATCTGTTTGATACGCTTGCAGCGGGACAGCGTGTCAGCCTGAGCCCGGCTCATCAAAGTCTGCTTGAAGAATTATCTG
CATTTGTACAGCAAGAAATACAACAGGTAGAAGAGTTGTCCACTGTTACTGAGCCTTTTAAAGCTCCGGTTGACGTAGCA
GTTTTGGAACATACTTTCAACTTGGGAGAGCTTTCAGCACGTATAGCGGCTGATAAAGCGCTGATGCATTCTGAACATAG
TAATCAGGTTGCTGATGCTGATCTGCGCGATATCTTCTTGGAAGAGGCCGAAGAATTACTGGCTGGTATGGATAGTGACC
TGAACAATTGGACAAAAGAATCAGGCCAAGTTACTGCTCTGAACAATCTAATGCGTTATTTGCATACCTTAAAAGGTGGT
GCAAACATGGTGCAGGCCACCCATATGGGATTAATTGCACATGAGCTGGAAAGCATTTATCAGCGAATTATTAACGGGCA
GGTTCAGGTCTCTACTGTACTGATGAGTATTATCCGGCTGGTACAGGATGAGCTGGCAGAACGCATCCAGATACTACGTG
AACAGCAGATTGACTACCCGGCGCCAGCAACTATTGAAATCCTCAAAAATATTGAGTCGATCAGCACTGGTGTATTAGTG
ACTACGGCTGAGCCAAAAGTAGCAGAAGAGAAGCTGTCCGAGTCGAGCCAAAATATTGAATCAGATATAGCTGATTGTAC
ACTTGCGGATGCGGAAATCGCTGAGCATTCCGAAGAGTTACAAACAGATGAACAGGTAAGATCAATTGTTGAAGAAGTTT
TTCTCGAGGAAGCCGAAGAGCTGTTACAGACCGCTCATAAATTACTAGATCAATGGGTAGAAGAGCGCAGTAACCGGAGT
CTGTTACTACAGCTGCAACGGAATGCTCATAGTCTTAAGGGCGGCGCACGGATGGCCGAGCTTGAGCCGGTAGCCGTGAT
TGCTTATGCGCTGGAAAATACTTTTGAACAATTTGGTCTGCACAATCTTACCACTAGTGTTTATGACCCGCTTTTACATA
CTGCTTTACGCTGGTTGGAAAATGCTATCTTCAAAGAGCAGTATGAAAACTTTGACAGTTTGAAGCACAGCTTGGACTCG
ATCCAGTTTACTGAAATTCCTGCTCAGCTCATCAATCAGATTCCTGCAGATGATATCGTAGCTGATGGCAGTCTGTTTGA
ATTCGTGCATGGTGATGGTACTGAACCGCCTTCCATGATGGGTGAATGGGACAATACAGAGCGGACTGAAAATAATGAAA
TGATCCGGATTTCAGCCGATCTGGTTGAGAAAATGATTGATCTTGCAGGTGAAAACTCCATCAACCGTTCCCGTATTGAA
ATGGATGTGGGACAGGTCGGTTCTATTCTTTCCGACATGGAACTGGCTATTCAACGACTGGCTGACCAGTTACGCCGTAT
GGAGGGTGAGCTTGAGAGTCAGATTATTGCTAAGCATGGTACAGAGAATTCACGTTATAGTGATTTTGATCCTTTAGAAA
TGGATCAGTATTCTTCGCTAAATCAGTTATCCAAATCACTGGCTGAGTCAGCATCTGACTTACTTGACTTTAAAACCACA
TTATCTGAAAAAATACGTGATACTGAAGGTCTGCTATTACAGCAGTCAAGGATTCAGGCAGAGATTCAGGAAAACCTGAT
GCGGACCCGTCTGGTACCCTTTTCTCGATTATTACCGCGTTTACAGCGCATAGCACGGCAGACCTCTTCAGCACTAAACC
GTCCTGCAGAACTCGTTGTTCAAAACACTGAAGGAGAGCTGGACCGCAATATTTTAGAGCGACTGGTCACCCCGCTTGAA
CATATGCTGCGAAATGCAATTGATCATGGTATTGAAACCATTGAGCAGCGTCTCAAGCAAGGGAAACCTGAAAGTGGCCG
TATTGAGCTAAATATTAATCGCCAAGGTACAGATGTCATCATTACTTTTACAGATGATGGCCAAGGTATTAATCTTGACA
AGCTGAAAAATAAAGCACTAGAGCGAGGCCTGATTGGAGCGGAACAAAAACTGGAAGCTGAAGAGCTGGCCCAGTTGATT
TTCCATCCAGGTTTAAGCACTGCAGCAGAAATTACCCAGATTTCTGGTCGTGGTGTAGGGCTGGATGTGGTACAGAGCAG
TATCAAGGCGATGGGTGGTCACGTGACGGTCGAGTCTGTACAGGGGCAGGGTACAACATTTACGATTCGTGTACCAACTA
CAGTAGCAATCAGTGATGCCCTGATGGTTAAAGCAGGTGACCAGCAATATGCTGTACCATTGGCGCAGATTGAACGTATT
GTGCGTATCTCTCCTTCTATGCTGGAAGACTATTTTGCTGGCAAAGAAGATACTTTCCGTATCGACAATATGTATTATAA
GCTGCGTTATCTTTCAGAGTTTGTAGCAAATCAGTCTCTGCCTCGTCTTACCGGTATAGCCCACTCTCTGCCGGTACTGC
TGATTAAAGGGAGCAGTGGCCAGACAGTAGCGTTACTAGTTGACCAGCTGGTCGGATCTCGTGCACAAATTGTGGTGAAA
CCAGTGGGTCAACAGCTGGCTAGCGTAGGTGCAGTAGCTGGTGCAACAATTTTGGGTGATGGACAGGTTTGTCTCATTCT
GGATGGGCAGTATATTGCTCGTCAGGTACAGTCTTCATTACGTGTCAAGGAAGTAAAAGAATCTCGTGAGTTGCATCGCT
TTAATGATGAACGACGTCTGATTATGATCGTTGATGACTCAGTCACTGTACGCAAAGTCACCAGCCGATTGCTTGAGCGT
CAAGGTTATGATGTAGTGACCGCTAAAGATGGTGTTGAAGCGATTGAACAGCTGGAAAGTATTAAGCCTGATTTAATGCT
GCTCGATATTGAAATGCCGCGTATGGATGGTTTTGAAGTAACTAATCTGGTACGTCATCATGATGTACATCGTAATATGC
CAATTATTATGATTACTTCACGTACAGGTGAGAAACATCGTGAGCGCGCTTTTGCACTCGGAGCAACGCAATATATGGGC
AAACCTTTCCAGGAAGCAGACCTGTTGGCCAATATTGAAGCGTTACTTGAGGTTATGGTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.968

100

0.638


Multiple sequence alignment